RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 SNX9Q9Y5X1 595 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 A0A0U1RQJ8 604 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 KPNA7A9QM74 516 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 CALCAP01258 141 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 CLCNKBP51801 687 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 BPIFB4P59827 614 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 SV2CQ496J9 727 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 NOMO2Q5JPE7 1267 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 GLYCTKQ8IVS8 523 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 ATRIPQ8WXE1 791 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 DDX1Q92499 740 aaKnown RBP24.25■■□□□ 1.47
UFD1-201ENST00000263202 GDAP2Q9NXN4 497 aa24.25■■□□□ 1.47
UFD1-201ENST00000263202 CHRNB2P17787 502 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 TNFAIP3P21580 790 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 RPL9P32969 192 aaKnown RBP24.24■■□□□ 1.47
UFD1-201ENST00000263202 LILRA4P59901 499 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 TUSC3Q13454 348 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 IKBKEQ14164 716 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 MFSD5Q6N075 450 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 RPUSD2Q8IZ73 545 aaKnown RBP24.24■■□□□ 1.47
UFD1-201ENST00000263202 FAM124BQ9H5Z6 455 aaPredicted RBP24.24■■□□□ 1.47
UFD1-201ENST00000263202 NENFQ9UMX5 172 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 PCDHA13Q9Y5I0 950 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 FNDC1Q4ZHG4 1894 aaPredicted RBP24.24■■□□□ 1.47
UFD1-201ENST00000263202 CASTOR2A6NHX0 329 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 PODXLO00592 558 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 CSF2RAP15509 400 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 UPP1Q16831 310 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 URGCPQ8TCY9 931 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 PAAF1Q9BRP4 392 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 NAGPAQ9UK23 515 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 LRFN2Q9ULH4 789 aa24.24■■□□□ 1.47
UFD1-201ENST00000263202 MKI67P46013 3256 aaKnown RBP24.23■■□□□ 1.47
UFD1-201ENST00000263202 MMEP08473 750 aa24.23■■□□□ 1.47
UFD1-201ENST00000263202 IGFBP6P24592 240 aaPredicted RBP24.23■■□□□ 1.47
UFD1-201ENST00000263202 CDR2Q01850 454 aa24.23■■□□□ 1.47
UFD1-201ENST00000263202 INCA1Q0VD86 236 aa24.23■■□□□ 1.47
UFD1-201ENST00000263202 ZNF394Q53GI3 561 aa24.23■■□□□ 1.47
UFD1-201ENST00000263202 TAF3Q5VWG9 929 aa24.23■■□□□ 1.47
UFD1-201ENST00000263202 WHAMMQ8TF30 809 aa24.23■■□□□ 1.47
UFD1-201ENST00000263202 CILPO75339 1184 aa24.22■■□□□ 1.47
UFD1-201ENST00000263202 GNA15P30679 374 aa24.22■■□□□ 1.47
UFD1-201ENST00000263202 FMO1Q01740 532 aa24.22■■□□□ 1.47
UFD1-201ENST00000263202 SOWAHAQ2M3V2 549 aa24.22■■□□□ 1.47
UFD1-201ENST00000263202 TMEM199Q8N511 208 aa24.22■■□□□ 1.47
UFD1-201ENST00000263202 KANSL3Q9P2N6 904 aa24.22■■□□□ 1.47
UFD1-201ENST00000263202 MAGEA1P43355 309 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 VAV2P52735 878 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 ALKBH5Q6P6C2 394 aaKnown RBP24.21■■□□□ 1.47
UFD1-201ENST00000263202 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.21■■□□□ 1.47
UFD1-201ENST00000263202 LIMS2Q7Z4I7 341 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 KIAA1328Q86T90 577 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 ZNF677Q86XU0 584 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 NPAS4Q8IUM7 802 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 TTC39CQ8N584 583 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 C3orf58Q8NDZ4 430 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 RABGGTAQ92696 567 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 DDX27Q96GQ7 796 aaKnown RBP24.21■■□□□ 1.47
UFD1-201ENST00000263202 UROC1Q96N76 676 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 TBC1D13Q9NVG8 400 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 HMGXB4Q9UGU5 601 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 BARX2Q9UMQ3 279 aaPredicted RBP24.21■■□□□ 1.47
UFD1-201ENST00000263202 TFR2Q9UP52 801 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 RCCD1A6NED2 376 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 DDHD2O94830 711 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 RAD23BP54727 409 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 DSC1Q08554 894 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 CCDC122Q5T0U0 273 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 PALB2Q86YC2 1186 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 ZNF280BQ86YH2 543 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 CASD1Q96PB1 797 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 TWNKQ96RR1 684 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 PCDHB18PQ96TA0 734 aa24.21■■□□□ 1.47
UFD1-201ENST00000263202 MRPL45Q9BRJ2 306 aaKnown RBP24.21■■□□□ 1.47
UFD1-201ENST00000263202 SEPT11Q9NVA2 429 aaKnown RBP24.21■■□□□ 1.47
UFD1-201ENST00000263202 RNF216Q9NWF9 866 aaPredicted RBP24.21■■□□□ 1.47
UFD1-201ENST00000263202 GOLGA6L9A6NEM1 432 aa24.2■■□□□ 1.46
UFD1-201ENST00000263202 B4GALT3O60512 393 aa24.2■■□□□ 1.46
UFD1-201ENST00000263202 C10orf76Q5T2E6 689 aa24.2■■□□□ 1.46
UFD1-201ENST00000263202 ABI1Q8IZP0 508 aa24.2■■□□□ 1.46
UFD1-201ENST00000263202 ELOVL4Q9GZR5 314 aa24.2■■□□□ 1.46
UFD1-201ENST00000263202 PCDH10Q9P2E7 1040 aa24.2■■□□□ 1.46
UFD1-201ENST00000263202 ABHD14A-ACY1A0A1B0GW23 586 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 HOXA2O43364 376 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 ABL1P00519 1130 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 ARHGAP25P42331 645 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 GATMP50440 423 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 NDST1P52848 882 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 ZNF662Q6ZS27 426 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 SLC4A11Q8NBS3 891 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 LZTFL1Q9NQ48 299 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 L1RE1Q9UN81 338 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 THAP12O43422 761 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 TACC1O75410 805 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 PAEPP09466 180 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 DPH6Q7L8W6 267 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 COLGALT2Q8IYK4 626 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 TOP6BLQ8N6T0 577 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 APPL2Q8NEU8 664 aa24.19■■□□□ 1.46
UFD1-201ENST00000263202 KBTBD7Q8WVZ9 684 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms