RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MMS19Q96T76 1030 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 LUC7L2Q9Y383 392 aaKnown RBP29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 ATICP31939 592 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 SLC11A1P49279 550 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 TMEM173Q86WV6 379 aaPredicted RBP29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 ZBED2Q9BTP6 218 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 CWH43Q9H720 699 aa29.44■■■□□ 2.3
SMARCD3-201ENST00000262188 GRXCR1A8MXD5 290 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 KPNA7A9QM74 516 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 AKR1B15C9JRZ8 316 aaPredicted RBP29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 FOXN3O00409 490 aaPredicted RBP29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 ATP2A2P16615 1042 aaKnown RBP29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 ARID5AQ03989 594 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 BTG3Q14201 252 aaPredicted RBP29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 MRPL9Q9BYD2 267 aaKnown RBP29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 IMPACTQ9P2X3 320 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 MRPL42Q9Y6G3 142 aaKnown RBP29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 NRP1O14786 923 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 RPL9P32969 192 aaKnown RBP29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 RABGGTBP53611 331 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 JAM2P57087 298 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 HERC6Q8IVU3 1022 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 TAF4BQ92750 862 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 ZNF560Q96MR9 790 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 SPAG5Q96R06 1193 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 VRTNQ9H8Y1 702 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 ACP6Q9NPH0 428 aa29.43■■■□□ 2.3
SMARCD3-201ENST00000262188 A0A1W2PQJ5 194 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 F8VZ95 297 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 USP8P40818 1118 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 BCAR1P56945 870 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 TNNC1P63316 161 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 ORC1Q13415 861 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 TRIM14Q14142 442 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 TIGD5Q53EQ6 642 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 PDXDC1Q6P996 788 aa29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 TIMM13Q9Y5L4 95 aaPredicted RBP29.42■■■□□ 2.3
SMARCD3-201ENST00000262188 LCHNA4D1U4 455 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 HCRTO43612 131 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 MFAP3P55082 362 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 GCNT1Q02742 428 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 RASIP1Q5U651 963 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 BCL7CQ8WUZ0 217 aaPredicted RBP29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 RNPC3Q96LT9 517 aaKnown RBP29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 STK33Q9BYT3 514 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 GALTP07902 379 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 ZBED6P86452 979 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 SV2CQ496J9 727 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 SPOUT1Q5T280 376 aaKnown RBP29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 MRPL45Q9BRJ2 306 aaKnown RBP29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 ABHD10Q9NUJ1 306 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 HMGXB4Q9UGU5 601 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 FBXL5Q9UKA1 691 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 PAXBP1Q9Y5B6 917 aa29.41■■■□□ 2.3
SMARCD3-201ENST00000262188 GFPT2O94808 682 aa29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 STAU1O95793 577 aaKnown RBP29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 TPM1P09493 284 aa29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 ACO1P21399 889 aaKnown RBP29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 SOWAHAQ2M3V2 549 aa29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 DDX27Q96GQ7 796 aaKnown RBP29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 UROC1Q96N76 676 aa29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 BCO2Q9BYV7 579 aa29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 MARCH5Q9NX47 278 aa29.4■■■□□ 2.3
SMARCD3-201ENST00000262188 MYOGP15173 224 aa29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 PNPLA4P41247 253 aa29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 TNNT3P45378 269 aaPredicted RBP29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 ZNF394Q53GI3 561 aa29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 DCLRE1AQ6PJP8 1040 aa29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 SENP8Q96LD8 212 aa29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 UBE2OQ9C0C9 1292 aaKnown RBP29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 L1RE1Q9UN81 338 aa29.39■■■□□ 2.3
SMARCD3-201ENST00000262188 KRT5P13647 590 aa29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 HTRA4P83105 476 aaPredicted RBP29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 ZNF397Q8NF99 534 aaPredicted RBP29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 SHC3Q92529 594 aa29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 SLC9A7Q96T83 725 aa29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 CISHQ9NSE2 258 aa29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 FAN1Q9Y2M0 1017 aa29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 NME7Q9Y5B8 376 aa29.39■■■□□ 2.29
SMARCD3-201ENST00000262188 CYB561D2O14569 222 aa29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 ALDH2P05091 517 aa29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 SKILP12757 684 aa29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 CDR1P51861 262 aa29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 DSTYKQ6XUX3 929 aa29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 CMTR2Q8IYT2 770 aaKnown RBP29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 GDF15Q99988 308 aa29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 PCDHB4Q9Y5E5 795 aa29.38■■■□□ 2.29
SMARCD3-201ENST00000262188 GOLGA6L6A8MZA4 724 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 TLL1O43897 1013 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 CNGA4Q8IV77 575 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 UBR7Q8N806 425 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 B3GALT6Q96L58 329 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 TWNKQ96RR1 684 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 GDAP2Q9NXN4 497 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 CYP26A1O43174 497 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 TBXAS1P24557 533 aaPredicted RBP29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 SOX5P35711 763 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 WSCD1Q658N2 575 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 WDR59Q6PJI9 974 aa29.37■■■□□ 2.29
SMARCD3-201ENST00000262188 TMEM270Q6UE05 265 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms