RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 MTBPQ96DY7 904 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 POLR3CQ9BUI4 534 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 RANBP17Q9H2T7 1088 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 C12orf65Q9H3J6 166 aaKnown RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 KCNK13Q9HB14 408 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 GPAMQ9HCL2 828 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 ZDHHC7Q9NXF8 308 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 PSMC3IPQ9P2W1 217 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-201ENST00000261443 WDR37Q9Y2I8 494 aa7.62□□□□□ -1.19
CSDE1-201ENST00000261443 SFI1A8K8P3 1242 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 USP17L5A8MUK1 530 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PIK3CDO00329 1044 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 MYL2P10916 166 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PIM1P11309 404 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CYP2J2P51589 502 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CHN2P52757 468 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PLOD1Q02809 727 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 MDH1BQ5I0G3 518 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 TMCO4Q5TGY1 634 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 LPCAT4Q643R3 524 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 C1orf228Q6PIY5 440 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ANKS1BQ7Z6G8 1248 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CATSPER3Q86XQ3 398 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 DZIP1Q86YF9 867 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 FBXO27Q8NI29 283 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PIP4K2CQ8TBX8 421 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PCDHB18PQ96TA0 734 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 HEMGNQ9BXL5 484 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 FOXP3Q9BZS1 431 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 NMUR2Q9GZQ4 415 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 BCAS3Q9H6U6 928 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 RIOX1Q9H6W3 641 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PCDH18Q9HCL0 1135 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ARHGEF4Q9NR80 690 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 BTG4Q9NY30 223 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 BTBD7Q9P203 1132 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SLC7A8Q9UHI5 535 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 FRMD4BQ9Y2L6 1034 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 NEU2Q9Y3R4 380 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 MYH11P35749 1972 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 GOLGA8RI6L899 631 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 MAGEB3O15480 346 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 VIL1P09327 827 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 DLDP09622 509 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CDK4P11802 303 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 AQP4P55087 323 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 GEMIN4P57678 1058 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 KDSRQ06136 332 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 DLG1Q12959 904 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 DCTN2Q13561 401 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 FASTKD3Q14CZ7 662 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SLC44A4Q53GD3 710 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 TBC1D9BQ66K14 1250 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 KLHDC10Q6PID8 442 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 DHDDSQ86SQ9 333 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF276Q8N554 614 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 FAM172AQ8WUF8 416 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 EYA3Q99504 573 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 NAP1L4Q99733 375 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 HERPUD2Q9BSE4 406 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 KLHL4Q9C0H6 718 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 VPS11Q9H270 941 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 USP29Q9HBJ7 922 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 TIMMDC1Q9NPL8 285 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SLC17A7Q9P2U7 560 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 TUBGCP4Q9UGJ1 667 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SAP30BPQ9UHR5 308 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 JAG2Q9Y219 1238 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 BCS1LQ9Y276 419 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 MYO3BQ8WXR4 1341 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CAMTA2O94983 1202 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SGPL1O95470 568 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CYP1A2P05177 515 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 RFX1P22670 979 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 RPL5P46777 297 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CD151P48509 253 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 CENPCQ03188 943 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 COG2Q14746 738 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 DNAL1Q4LDG9 190 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SH3D19Q5HYK7 790 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 MAP3K21Q5TCX8 1036 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ALYREFQ86V81 257 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 LRRC43Q8N309 656 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PYDC1Q8WXC3 89 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 MAML3Q96JK9 1138 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 PRICKLE1Q96MT3 831 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ANKRD2Q9GZV1 360 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SSU72Q9NP77 194 aaKnown RBP7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ARHGEF38Q9NXL2 777 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 UVRAGQ9P2Y5 699 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SLC24A2Q9UI40 661 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF711Q9Y462 761 aa7.61□□□□□ -1.19
CSDE1-201ENST00000261443 SPECC1L-ADORA2AF8WAN1 911 aa7.6□□□□□ -1.19
CSDE1-201ENST00000261443 NDC80O14777 642 aa7.6□□□□□ -1.19
CSDE1-201ENST00000261443 TM9SF1O15321 606 aa7.6□□□□□ -1.19
CSDE1-201ENST00000261443 SLC26A4O43511 780 aa7.6□□□□□ -1.19
CSDE1-201ENST00000261443 STRNO43815 780 aa7.6□□□□□ -1.19
CSDE1-201ENST00000261443 STK10O94804 968 aaKnown RBP7.6□□□□□ -1.19
CSDE1-201ENST00000261443 TGDSO95455 350 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms