RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 FAM189A1O60320 539 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 VAMP7P51809 220 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 DLG4P78352 724 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 ZBTB41Q5SVQ8 909 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 PLEKHO2Q8TD55 490 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 MFSD14AQ96MC6 490 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 TSC22D3Q99576 134 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 SUDS3Q9H7L9 328 aaPredicted RBP20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 STIM2Q9P246 746 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 NOD1Q9Y239 953 aa20.16■□□□□ 0.82
COL4A3BP-201ENST00000261415 ZNF233A6NK53 670 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 M0QZ92 97 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 GSTA1P08263 222 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 CYP24A1Q07973 514 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 PCBP1Q15365 356 aaKnown RBP eCLIP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 HIBCHQ6NVY1 386 aaPredicted RBP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 TEX9Q8N6V9 391 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 ANKRD27Q96NW4 1050 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 LRRC1Q9BTT6 524 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 PDZD7Q9H5P4 517 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 PPANQ9NQ55 473 aaKnown RBP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 CDY2AQ9Y6F7 541 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 PDCD11Q14690 1871 aaKnown RBP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 IMPDH2P12268 514 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 MCCD1P59942 119 aaPredicted RBP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 PTK7Q13308 1070 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 CATSPER4Q7RTX7 472 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 MREGQ8N565 214 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 CCT6BQ92526 530 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 ARMC5Q96C12 935 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 CDT1Q9H211 546 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 DMGDHQ9UI17 866 aaKnown RBP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 SIK3Q9Y2K2 1263 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 TRPV2Q9Y5S1 764 aa20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 KIAA0100Q14667 2235 aaKnown RBP20.15■□□□□ 0.82
COL4A3BP-201ENST00000261415 CFAP73A6NFT4 308 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 ARVCFO00192 962 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 PDE2AO00408 941 aaPredicted RBP20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 OGTO15294 1046 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 TRAPPC3O43617 180 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 KLK7P49862 253 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 PPP1R7Q15435 360 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 SEZ6Q53EL9 994 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 SDCCAG8Q86SQ7 713 aaPredicted RBP20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 CTSHP09668 335 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 THPOP40225 353 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 C1orf220Q5T0J3 134 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 GKAP1Q5VSY0 366 aaPredicted RBP20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 SPATA21Q7Z572 469 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 DHX38Q92620 1227 aaKnown RBP20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 CCDC127Q96BQ5 260 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 CRISPLD2Q9H0B8 497 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 MMRN2Q9H8L6 949 aa20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 REXO2Q9Y3B8 237 aaKnown RBP20.14■□□□□ 0.81
COL4A3BP-201ENST00000261415 B4GALT4O60513 344 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 LINGO3P0C6S8 592 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 PRLRP16471 622 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 TNFSF9P41273 254 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 FMO5P49326 533 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 MGAT3Q09327 533 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 KCNMA1Q12791 1236 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 SPRED3Q2MJR0 410 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 TMC2Q8TDI7 906 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 PCMTD1Q96MG8 357 aaPredicted RBP20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 ZNF570Q96NI8 536 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 SENP6Q9GZR1 1112 aaPredicted RBP20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 TRPV6Q9H1D0 765 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 RBAKQ9NYW8 714 aaPredicted RBP20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 GOLGA6L10A6NI86 522 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 CHRNA1P02708 482 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 KRT9P35527 623 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 CBWD6Q4V339 395 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 CBWD3Q5JTY5 395 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 CBWD5Q5RIA9 395 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 USP37Q86T82 979 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 U2AF1L4Q8WU68 220 aaKnown RBP20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 AGPAT5Q9NUQ2 364 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 ZFATQ9P243 1243 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 TRIM10Q9UDY6 481 aa20.13■□□□□ 0.81
COL4A3BP-201ENST00000261415 SGPL1O95470 568 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 MCF2P10911 925 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 HOXA11P31270 313 aaPredicted RBP20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 ENPEPQ07075 957 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 PPP3CAQ08209 521 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 TRIM71Q2Q1W2 868 aaKnown RBP20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 IFT20Q8IY31 132 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 THNSL1Q8IYQ7 743 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 GALNT15Q8N3T1 639 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 CCDC63Q8NA47 563 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 B4GALNT2Q8NHY0 566 aa20.12■□□□□ 0.81
COL4A3BP-201ENST00000261415 GTPBP10A4D1E9 387 aaKnown RBP20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 WNT7BP56706 349 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 PAK2Q13177 524 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 PSMD6Q15008 389 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 RBM12BQ8IXT5 1001 aaKnown RBP20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 ADPGKQ9BRR6 497 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 SEZ6LQ9BYH1 1024 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 CPSF3Q9UKF6 684 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms