RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 SNX17Q15036 470 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 CLUL1Q15846 466 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 SEZ6Q53EL9 994 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 WDR44Q5JSH3 913 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 DDX42Q86XP3 938 aaKnown RBP eCLIP18.84■□□□□ 0.61
SSB-201ENST00000260956 LRRC71Q8N4P6 559 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 PRELID2Q8N945 189 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 IFT81Q8WYA0 676 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 CELF4Q9BZC1 486 aaKnown RBP18.84■□□□□ 0.61
SSB-201ENST00000260956 ZMYND15Q9H091 742 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 STARD7Q9NQZ5 370 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 CNOT8Q9UFF9 292 aaKnown RBP18.84■□□□□ 0.61
SSB-201ENST00000260956 OGTO15294 1046 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 C22orf31O95567 290 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 CFHP08603 1231 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 BIRC3Q13489 604 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 UAP1Q16222 522 aaPredicted RBP18.83■□□□□ 0.61
SSB-201ENST00000260956 PPP2R5EQ16537 467 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 TRIM60Q495X7 471 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 TTMPQ5BVD1 217 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 DUPD1Q68J44 220 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 TSHZ1Q6ZSZ6 1077 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 EXOC8Q8IYI6 725 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 TRAPPC12Q8WVT3 735 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 GLG1Q92896 1179 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 GLT1D1Q96MS3 346 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 NAP1L3Q99457 506 aaPredicted RBP18.83■□□□□ 0.61
SSB-201ENST00000260956 C16orf70Q9BSU1 422 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 TXLNGYQ9BZA5 131 aa18.83■□□□□ 0.61
SSB-201ENST00000260956 CCDC66A2RUB6 948 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 CLDN3O15551 220 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 PPFIA4O75335 1185 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 MYBL1P10243 752 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 PYGMP11217 842 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 TBXAS1P24557 533 aaPredicted RBP18.83■□□□□ 0.6
SSB-201ENST00000260956 CDK7P50613 346 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 AP3M2P53677 418 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 BPIFB4P59827 614 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 NCOA4Q13772 614 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 DGKDQ16760 1214 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 NAA35Q5VZE5 725 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 TRIM72Q6ZMU5 477 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 UBL4BQ8N7F7 174 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 RNF149Q8NC42 400 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 C1orf131Q8NDD1 294 aaKnown RBP18.83■□□□□ 0.6
SSB-201ENST00000260956 NFKBIZQ9BYH8 718 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 TRIM7Q9C029 511 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 C2orf40Q9H1Z8 148 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 SMARCAD1Q9H4L7 1026 aa18.83■□□□□ 0.6
SSB-201ENST00000260956 EVPLQ92817 2033 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 TMEM110-MUSTN1A8MSY1 372 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 H0YGN5 161 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 PHF2O75151 1096 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 GUCY2FP51841 1108 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 MBTD1Q05BQ5 628 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 TTC27Q6P3X3 843 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 MAATS1Q7Z4T9 603 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 EFCAB13Q8IY85 973 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 C12orf50Q8NA57 414 aaPredicted RBP18.82■□□□□ 0.6
SSB-201ENST00000260956 SLC43A3Q8NBI5 491 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 RBBP8NLQ8NC74 664 aaPredicted RBP18.82■□□□□ 0.6
SSB-201ENST00000260956 TRIM51Q9BSJ1 452 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 ZDHHC18Q9NUE0 388 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 NFS1Q9Y697 457 aa18.82■□□□□ 0.6
SSB-201ENST00000260956 FAM187AA6NFU0 413 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 NOP56O00567 594 aaKnown RBP18.81■□□□□ 0.6
SSB-201ENST00000260956 ACKR2O00590 384 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 MEFVO15553 781 aaPredicted RBP18.81■□□□□ 0.6
SSB-201ENST00000260956 DAPK3O43293 454 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 ZEB2O60315 1214 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 HBP1O60381 514 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 SHOX2O60902 331 aaPredicted RBP18.81■□□□□ 0.6
SSB-201ENST00000260956 RPS6KA5O75582 802 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 RRM1P23921 792 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 TLE2Q04725 743 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 ITGA7Q13683 1181 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 DHX34Q14147 1143 aaKnown RBP18.81■□□□□ 0.6
SSB-201ENST00000260956 NBPF20Q3BBV1 942 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 C1orf53Q5VUE5 145 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 EEF1DP3Q658K8 133 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 PHF13Q86YI8 300 aaPredicted RBP18.81■□□□□ 0.6
SSB-201ENST00000260956 IFNLR1Q8IU57 520 aaPredicted RBP18.81■□□□□ 0.6
SSB-201ENST00000260956 CCDC26Q8TAB7 109 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 DPF3Q92784 378 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 ARL8AQ96BM9 186 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
SSB-201ENST00000260956 XYLT2Q9H1B5 865 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 PCYOX1Q9UHG3 505 aa18.81■□□□□ 0.6
SSB-201ENST00000260956 TCRBV7S2A1N4TA0A589 114 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 GOLGA8KD6RF30 607 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 F2P00734 622 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 CST3P01034 146 aaPredicted RBP18.8■□□□□ 0.6
SSB-201ENST00000260956 LGALS2P05162 132 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 FLT3P36888 993 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 HIC1Q14526 733 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 MAPK6Q16659 721 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 AMHR2Q16671 573 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 LLGL2Q6P1M3 1020 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 MPZL3Q6UWV2 235 aa18.8■□□□□ 0.6
SSB-201ENST00000260956 SLC13A5Q86YT5 568 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms