RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PAXBP1Q9Y5B6 917 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 DNAH7Q8WXX0 4024 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 A0A0U1RQG5 324 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PAPSS1O43252 624 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 CILPO75339 1184 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PRAMEF12O95522 483 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 KCNE1P15382 129 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PLS1Q14651 629 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 TIGD5Q53EQ6 642 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 RRAGBQ5VZM2 374 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PLEKHH3Q7Z736 793 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PELI3Q8N2H9 469 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SP7Q8TDD2 431 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MRPL11Q9Y3B7 192 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 GRXCR1A8MXD5 290 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 WDR64B1ANS9 1081 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 CLDN5O00501 218 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MAPK13O15264 365 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PTMAP06454 111 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 IRS1P35568 1242 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PAK1Q13153 545 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 APBA2Q99767 749 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SH2D4AQ9H788 454 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 YBX2Q9Y2T7 364 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SPTBP11277 2137 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 FOSP01100 380 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 NR2F2P24468 414 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 NOP2P46087 812 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 HDAC4P56524 1084 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 LILRA4P59901 499 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 FZD5Q13467 585 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MEI1Q5TIA1 1274 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 KLHL10Q6JEL2 608 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 CPLX2Q6PUV4 134 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 TMC8Q8IU68 726 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 ALG14Q96F25 216 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 TTYH1Q9H313 450 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 HOOK1Q9UJC3 728 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 HDAC9Q9UKV0 1011 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SLCO1B1Q9Y6L6 691 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 NRCAMQ92823 1304 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MYBPHLA2RUH7 354 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 ACKR2O00590 384 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 RIOK3O14730 519 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 CPLX1O14810 134 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MAFGO15525 162 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SOAT2O75908 522 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 CDKL5O76039 1030 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SP4Q02446 784 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PTPROQ16827 1216 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 MTERF2Q49AM1 385 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 GLRA4Q5JXX5 417 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 TMEM215Q68D42 235 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 ASTLQ6HA08 431 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 LILRA6Q6PI73 481 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 KDM7AQ6ZMT4 941 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 NCAPG2Q86XI2 1143 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PYROXD2Q8N2H3 581 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 SLC10A4Q96EP9 437 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 ASIC4Q96FT7 647 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 PANX2Q96RD6 677 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 IPPQ9Y573 584 aa6.12□□□□□ -1.43
TOPBP1-201ENST00000260810 OTOGLQ3ZCN5 2332 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 STRNO43815 780 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 WISP3O95389 354 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 CTSAP10619 480 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 LRPAP1P30533 357 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 HTRA4P83105 476 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 GPR153Q6NV75 609 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 USP29Q9HBJ7 922 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 VTA1Q9NP79 307 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 ZNF215Q9UL58 517 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 ARL5CA6NH57 179 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 M0QZQ0 153 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 F11P03951 625 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 IREB2P48200 963 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 SETQ01105 290 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 GLYCTKQ8IVS8 523 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 BRSK2Q8IWQ3 736 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 PRELID2Q8N945 189 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 RDH13Q8NBN7 331 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 TNFSF13BQ9Y275 285 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 PPP2R2CQ9Y2T4 447 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 NEUROG3Q9Y4Z2 214 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 CSADQ9Y600 493 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 GVINP1Q7Z2Y8 2422 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 IQCA1LA6NCM1 817 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 GAS7O60861 476 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 DGKIO75912 1065 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 NDUFA10O95299 355 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 ZDHHC11BP0C7U3 371 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 ARNTP27540 789 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 NAMPTP43490 491 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 CENPCQ03188 943 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 ADGRE1Q14246 886 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 SLC5A9Q2M3M2 681 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 NADSYN1Q6IA69 706 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 SEPT1Q8WYJ6 367 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 TRIM34Q9BYJ4 488 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms