RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 PDCD7Q8N8D1 485 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 PPHLN1Q8NEY8 458 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 DENND1AQ8TEH3 1009 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 AGBL1Q96MI9 1066 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 EIF2AQ9BY44 585 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 DMAP1Q9NPF5 467 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 CCDC177Q9NQR7 707 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 H2AFY2Q9P0M6 372 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 PHTF1Q9UMS5 762 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 NDRG2Q9UN36 371 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 SLC27A6Q9Y2P4 619 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 UMODL1Q5DID0 1318 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 KPNA7A9QM74 516 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 TMX2-CTNND1H3BSU7 103 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 P4HA2O15460 535 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FBXO21O94952 628 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 AKAP5P24588 427 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ADCYAP1R1P41586 468 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FNTAP49354 379 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FLT3LGP49771 235 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 LBX1P52954 281 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 DYNLL1P63167 89 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 CACNB1Q02641 598 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 MAP3K10Q02779 954 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ITGADQ13349 1161 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 TRIP4Q15650 581 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 PKN1Q16512 942 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 TCEAL5Q5H9L2 206 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CEP85LQ5SZL2 805 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 TMCO4Q5TGY1 634 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ATF7IP2Q5U623 682 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 RRAGAQ7L523 313 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ATCAYQ86WG3 371 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CATSPER3Q86XQ3 398 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 PDIK1LQ8N165 341 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CARNMT1Q8N4J0 409 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 BEND7Q8N7W2 519 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 SH3RF3Q8TEJ3 882 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 USP33Q8TEY7 942 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNF38-201ENST00000259605 FAM213AQ9BRX8 229 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 GTPBP2Q9BX10 602 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 VPS16Q9H269 839 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 PACSIN2Q9UNF0 486 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 TRAF3IP3Q9Y228 551 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MED14O60244 1454 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MYOM2P54296 1465 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 A6NCN8 305 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 E7EWF7 191 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 GPR25O00155 361 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 MAN1A2O60476 641 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 RNF40O75150 1001 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ENTPD5O75356 428 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 FAM107AO95990 144 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 FYNP06241 537 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ANXA6P08133 673 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ESRRAP11474 423 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 COX7A2P14406 83 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SELPP16109 830 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 AGXTP21549 392 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 YWHAQP27348 245 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 HMOX2P30519 316 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ADD2P35612 726 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 CCL23P55773 120 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ERVK-21P61565 698 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ERVK-9P63128 1117 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ERVK-24P63145 666 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SP2Q02086 613 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 KARSQ15046 597 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 CDO1Q16878 200 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 KRT24Q2M2I5 525 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 C8orf34Q49A92 452 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 FAM171A1Q5VUB5 890 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TRIM65Q6PJ69 517 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 EFL1Q7Z2Z2 1120 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 ZNF513Q8N8E2 541 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 RASGEF1AQ8N9B8 481 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 IGSF22Q8N9C0 903 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 WHAMMQ8TF30 809 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 RPRD1AQ96P16 312 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 SPZ1Q9BXG8 430 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNF38-201ENST00000259605 MRTO4Q9UKD2 239 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 CDH7Q9ULB5 785 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 PLXNC1O60486 1568 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ERVK-7P63135 1459 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 PIPSLA2A3N6 862 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 C2orf81A6NN90 581 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 RHPN2P1A8MT19 583 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 H3BRB1 525 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 DFFAO00273 331 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 CASKO14936 926 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SLC27A2O14975 620 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TDP2O95551 362 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SYT1P21579 422 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 CAP2P40123 477 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 PPP3CCP48454 512 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 RHOAP61586 193 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ATP2C1P98194 919 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 TRADDQ15628 312 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms