RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MAGED2Q9UNF1 606 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-201ENST00000252597 EXOC7Q9UPT5 735 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 DPPA5A6NC42 116 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 WEE2P0C1S8 567 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-201ENST00000252597 PRKG1Q13976 671 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 CDO1Q16878 200 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 MOXD1Q6UVY6 613 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 RFWD2Q8NHY2 731 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 RMDN3Q96TC7 470 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-201ENST00000252597 LRRC19Q9H756 370 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 TBX20Q9UMR3 447 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 TELO2Q9Y4R8 837 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 TXNDC9O14530 226 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 CLGNO14967 610 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 KRT36O76013 467 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 HLA-DRAP01903 254 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 ESRRAP11474 423 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-201ENST00000252597 GZMAP12544 262 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 HOXA10P31260 410 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-201ENST00000252597 DSG3P32926 999 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 CIITAP33076 1130 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 PTDSS1P48651 473 aaKnown RBP12.64□□□□□ -0.39
USHBP1-201ENST00000252597 STAT4Q14765 748 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 CLEC16AQ2KHT3 1053 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 EEPD1Q7L9B9 569 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 NLRX1Q86UT6 975 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 EMC1Q8N766 993 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 SHC3Q92529 594 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 SYT11Q9BT88 431 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 DENND2DQ9H6A0 471 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-201ENST00000252597 SMYD3Q9H7B4 428 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 EBF2Q9HAK2 575 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
USHBP1-201ENST00000252597 ARHGAP42A6NI28 874 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 CAPN9O14815 690 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 FSCN2O14926 492 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 CCDC62Q6P9F0 684 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 OGFOD1Q8N543 542 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 TCP10LQ8TDR4 215 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 UCMAQ8WVF2 138 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 DNAJC9Q8WXX5 260 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 CCDC124Q96CT7 223 aaKnown RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 MAK16Q9BXY0 300 aaKnown RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 SLC17A7Q9P2U7 560 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 MYH11P35749 1972 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 PLSCR1O15162 318 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 MT-ND3P03897 115 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 SERPINB3P29508 390 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 ALCAMQ13740 583 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 KPNB1Q14974 876 aaKnown RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 SGSM1Q2NKQ1 1148 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 RNF220Q5VTB9 566 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 SCYL2Q6P3W7 929 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 CENPUQ71F23 418 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 OTOAQ7RTW8 1153 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 USP37Q86T82 979 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 TTC7BQ86TV6 843 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 UTP4Q969X6 686 aaKnown RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 PRR11Q96HE9 360 aaPredicted RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 MBOAT7Q96N66 472 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 ARHGEF3Q9NR81 526 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 ZFATQ9P243 1243 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 PPARGC1AQ9UBK2 798 aaKnown RBP12.63□□□□□ -0.39
USHBP1-201ENST00000252597 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 UMODL1Q5DID0 1318 aa12.63□□□□□ -0.39
USHBP1-201ENST00000252597 HAUS5O94927 633 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 ABL2P42684 1182 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 PPP2R5CQ13362 524 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 KHDC1Q4VXA5 237 aaKnown RBP12.62□□□□□ -0.39
USHBP1-201ENST00000252597 SCARA3Q6AZY7 606 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 CC2D2BQ6DHV5 1058 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 CRELD2Q6UXH1 353 aaPredicted RBP12.62□□□□□ -0.39
USHBP1-201ENST00000252597 BSNDQ8WZ55 320 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 IMPG2Q9BZV3 1241 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 PIDD1Q9HB75 910 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
USHBP1-201ENST00000252597 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 DCTN3O75935 186 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 CYP1A2P05177 515 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 GNAT1P11488 350 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 GM2AP17900 193 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 TUBP50607 506 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 ARFIP2P53365 341 aa12.62□□□□□ -0.39
USHBP1-201ENST00000252597 DLGAP5Q15398 846 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms