RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 MS4A4AQ96JQ5 239 aa26.76■■□□□ 1.87
TMEM55B-201ENST00000250489 MAGEB2O15479 319 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 CETPP11597 493 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 AMHR2Q16671 573 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 RUFY4Q6ZNE9 571 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 IFNLR1Q8IU57 520 aaPredicted RBP26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 AFG1LQ8WV93 481 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 EMID1Q96A84 441 aaPredicted RBP26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 KATNBL1Q9H079 304 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 CWC15Q9P013 229 aaKnown RBP26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 MGAMO43451 1857 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 UNCXA6NJT0 531 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 BTBD19C9JJ37 291 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 CALB1P05937 261 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 ATP1A2P50993 1020 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 KATNAL2Q8IYT4 538 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 TMEM35BQ8NCS4 154 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 EPB41L4BQ9H329 900 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 ZNF408Q9H9D4 720 aa26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.75■■□□□ 1.87
TMEM55B-201ENST00000250489 A0A087WZ62 844 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 IQCA1LA6NCM1 817 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 A6NNZ2 444 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 EIF3HO15372 352 aaKnown RBP eCLIP26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 ADCYAP1R1P41586 468 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 PMS2P54278 862 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 TUBB8Q3ZCM7 444 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 ZNF467Q7Z7K2 595 aaPredicted RBP26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 TFAP2BQ92481 460 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 FDXACB1Q9BRP7 624 aaPredicted RBP26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 ZNF518BQ9C0D4 1074 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 CHST7Q9NS84 486 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 IP6K2Q9UHH9 426 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 PCDHGC3Q9UN70 934 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 POLIQ9UNA4 740 aa26.74■■□□□ 1.87
TMEM55B-201ENST00000250489 COL1A2P08123 1366 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 TCRBV5S1A1TA0A578 114 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 TMEM191CA6NGB0 347 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 ZNF286BP0CG31 522 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 MCF2P10911 925 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 CDH5P33151 784 aaPredicted RBP26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 YWHAEP62258 255 aaKnown RBP26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 FOXR1Q6PIV2 292 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 ART4Q93070 314 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 CENPHQ9H3R5 247 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 MORF4L1Q9UBU8 362 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 MTRF1LQ9UGC7 380 aaKnown RBP26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 SIX4Q9UIU6 781 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 USTQ9Y2C2 406 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 CCL15-CCL14A0A0B4J2E2 113 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 CSDE1O75534 798 aaKnown RBP26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 NFICP08651 508 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 RPL7AP62424 266 aaKnown RBP26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 CCL15Q16663 113 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 AGBL2Q5U5Z8 902 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 ILDR2Q71H61 639 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 PNMA8AQ86V59 439 aaPredicted RBP26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 WDTC1Q8N5D0 677 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 C16orf70Q9BSU1 422 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 DCLK3Q9C098 648 aa26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 PABPC3Q9H361 631 aaKnown RBP26.73■■□□□ 1.87
TMEM55B-201ENST00000250489 MEFVO15553 781 aaPredicted RBP26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 STRNO43815 780 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 STAG3L1P0CL83 205 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 RALAP11233 206 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 EIF3BP55884 814 aaKnown RBP26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 TNFAIP2Q03169 654 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 KLF1Q13351 362 aaPredicted RBP26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 PDCLQ13371 301 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 SNX1Q13596 522 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 PPP1R7Q15435 360 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 TTC19Q6DKK2 380 aaPredicted RBP26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 CCDC50Q8IVM0 306 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 ATG4AQ8WYN0 398 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 PPP1R16BQ96T49 567 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 FAM129AQ9BZQ8 928 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 PDZD7Q9H5P4 517 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 NXF1Q9UBU9 619 aaKnown RBP26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 AKT3Q9Y243 479 aa26.72■■□□□ 1.87
TMEM55B-201ENST00000250489 LACTBL1A8MY62 500 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 PPFIA4O75335 1185 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 SNAI1O95863 264 aaPredicted RBP26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 KRT19P08727 400 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 NUDT17P0C025 328 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 EIF4BP23588 611 aaKnown RBP26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 GTF2A2P52657 109 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 KRT17Q04695 432 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 C1orf127Q8N9H9 656 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 EXD1Q8NHP7 514 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 BRI3BPQ8WY22 251 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 IVNS1ABPQ9Y6Y0 642 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 GCLCP48506 637 aaPredicted RBP26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 MKRN3Q13064 507 aaKnown RBP26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 DNAJC24Q6P3W2 148 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 BCO2Q9BYV7 579 aa26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 R3HDM2Q9Y2K5 976 aaKnown RBP26.71■■□□□ 1.87
TMEM55B-201ENST00000250489 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.7■■□□□ 1.86
TMEM55B-201ENST00000250489 VTNP04004 478 aa26.7■■□□□ 1.86
TMEM55B-201ENST00000250489 SSR1P43307 286 aaKnown RBP26.7■■□□□ 1.86
TMEM55B-201ENST00000250489 ZNF252P-AS1Q0IIN9 211 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms