RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ZNF148Q9UQR1 794 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 LY75O60449 1722 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 ALOX15BO15296 676 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 GTF2H1P32780 548 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 NFX1Q12986 1120 aaKnown RBP16.39■□□□□ 0.21
DDX55-201ENST00000238146 GPS1Q13098 491 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 MAMLD1Q13495 774 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 FAM102BQ5T8I3 360 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 SLC39A4Q6P5W5 647 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 C4orf50Q6ZRC1 276 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 ZBED8Q8IZ13 594 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 RBBP8NLQ8NC74 664 aaPredicted RBP16.39■□□□□ 0.21
DDX55-201ENST00000238146 SH3GL3Q99963 347 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 KANSL3Q9P2N6 904 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 PI4K2BG5E9Z4 385 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 LYPLA2O95372 231 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 KRT4P19013 534 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 UGCGQ16739 394 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 TSNAXIP1Q2TAA8 658 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 KAZNQ674X7 775 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 IL31RAQ8NI17 732 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 ZBTB10Q96DT7 871 aa16.39■□□□□ 0.21
DDX55-201ENST00000238146 CADM1Q9BY67 442 aaKnown RBP16.39■□□□□ 0.21
DDX55-201ENST00000238146 ASTN2O75129 1339 aaPredicted RBP16.38■□□□□ 0.21
DDX55-201ENST00000238146 LRRD1A4D1F6 860 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 ECE2O60344 883 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 LMNAP02545 664 aaKnown RBP16.38■□□□□ 0.21
DDX55-201ENST00000238146 FESP07332 822 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 NPTX2P47972 431 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 KLC1Q07866 573 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 RASA2Q15283 850 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 PODNQ7Z5L7 613 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 LDHDQ86WU2 507 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 ZNF398Q8TD17 642 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 TDRD3Q9H7E2 651 aaKnown RBP16.38■□□□□ 0.21
DDX55-201ENST00000238146 PSMC3IPQ9P2W1 217 aaPredicted RBP16.38■□□□□ 0.21
DDX55-201ENST00000238146 SLC24A2Q9UI40 661 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 TMX2Q9Y320 296 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 DENND3A2RUS2 1198 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 ADRA1DP25100 572 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 LBRQ14739 615 aaKnown RBP16.38■□□□□ 0.21
DDX55-201ENST00000238146 MORF4L2Q15014 288 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 SGSM1Q2NKQ1 1148 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 LIN9Q5TKA1 542 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 DSTYKQ6XUX3 929 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 APBB1IPQ7Z5R6 666 aaPredicted RBP16.38■□□□□ 0.21
DDX55-201ENST00000238146 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 ZNF276Q8N554 614 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 ALLCQ8N6M5 410 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 CSRNP1Q96S65 589 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 TIPINQ9BVW5 301 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 C1orf112Q9NSG2 853 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 NMRK1Q9NWW6 199 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 COL20A1Q9P218 1284 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 DCTN4Q9UJW0 460 aa16.38■□□□□ 0.21
DDX55-201ENST00000238146 MAP3K13O43283 966 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 AHCYL1O43865 530 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 RXRBP28702 533 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 INHBEP58166 350 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 NOP14P78316 857 aaKnown RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 MUM1Q2TAK8 710 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 EAPPQ56P03 285 aaPredicted RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 RNASEH2BQ5TBB1 312 aaKnown RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 PLA2G4FQ68DD2 849 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 DRICH1Q6PGQ1 229 aaPredicted RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 CHURC1Q8WUH1 139 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 FAM136AQ96C01 138 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 STOML1Q9UBI4 398 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 WDR91A4D1P6 747 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 SIGLEC16A6NMB1 481 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 TLR3O15455 904 aaKnown RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 HNRNPCL1O60812 293 aaKnown RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 ZC3H11AO75152 810 aaKnown RBP eCLIP16.37■□□□□ 0.212e-6■■■■□ 25.8
DDX55-201ENST00000238146 BANF1O75531 89 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 ZWINTO95229 277 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 NPTXRO95502 500 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 TCF4P15884 667 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 SSTR3P32745 418 aaPredicted RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 GPX6P59796 221 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 MXRA7P84157 204 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 OVGP1Q12889 678 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 PDIA2Q13087 525 aaKnown RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 EFHC2Q5JST6 749 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 PLEKHA7Q6IQ23 1121 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 USP37Q86T82 979 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 ZNF516Q92618 1163 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 AGO4Q9HCK5 861 aaKnown RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 MRPL47Q9HD33 250 aaKnown RBP16.37■□□□□ 0.21
DDX55-201ENST00000238146 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
DDX55-201ENST00000238146 NFASCO94856 1347 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 NVLO15381 856 aaKnown RBP16.36■□□□□ 0.21
DDX55-201ENST00000238146 ATF7P17544 494 aaPredicted RBP16.36■□□□□ 0.21
DDX55-201ENST00000238146 SESN3P58005 492 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 BPIFB4P59827 614 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 NOMO3P69849 1222 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms