RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 P4HA2O15460 535 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 N4BP1O75113 896 aaKnown RBP25.39■■□□□ 1.65
HOMER3-201ENST00000221222 TKTP29401 623 aaKnown RBP25.39■■□□□ 1.65
HOMER3-201ENST00000221222 PIK3CAP42336 1068 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 ZNF445P59923 1031 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 PTPN14Q15678 1187 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 SGSM1Q2NKQ1 1148 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 KIAA1841Q6NSI8 718 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 CREBRFQ8IUR6 639 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 MRPL43Q8N983 215 aaKnown RBP25.39■■□□□ 1.65
HOMER3-201ENST00000221222 FBXL13Q8NEE6 735 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 PIK3R5Q8WYR1 880 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 TAF4BQ92750 862 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 CBX8Q9HC52 389 aa25.39■■□□□ 1.65
HOMER3-201ENST00000221222 MRPL17Q9NRX2 175 aaKnown RBP25.39■■□□□ 1.65
HOMER3-201ENST00000221222 BRWD1Q9NSI6 2320 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 CYB561D2O14569 222 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 ASS1P00966 412 aaKnown RBP25.38■■□□□ 1.65
HOMER3-201ENST00000221222 AFPP02771 609 aaKnown RBP25.38■■□□□ 1.65
HOMER3-201ENST00000221222 ODC1P11926 461 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 ZNF18P17022 549 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 TYMPP19971 482 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 MAN2A1Q16706 1144 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 PLPP4Q5VZY2 271 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 PDXDC1Q6P996 788 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 CEP57Q86XR8 500 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 APPL2Q8NEU8 664 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 MICAL1Q8TDZ2 1067 aa25.38■■□□□ 1.65
HOMER3-201ENST00000221222 CXCL14O95715 111 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 CYP11A1P05108 521 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 MYL7Q01449 175 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 MRPL58Q14197 206 aaKnown RBP25.37■■□□□ 1.65
HOMER3-201ENST00000221222 ZNF699Q32M78 642 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 LIMS2Q7Z4I7 341 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 AUTS2Q8WXX7 1259 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 RIN2Q8WYP3 895 aaPredicted RBP25.37■■□□□ 1.65
HOMER3-201ENST00000221222 TUBGCP2Q9BSJ2 902 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 RAB20Q9NX57 234 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 DSEQ9UL01 958 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 PCDHGC5Q9Y5F6 944 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 SNX9Q9Y5X1 595 aa25.37■■□□□ 1.65
HOMER3-201ENST00000221222 C2orf71A6NGG8 1288 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 HIDE1A8MVS5 230 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 CSPG5O95196 566 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 BMP1P13497 986 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 VARS2Q5ST30 1063 aaKnown RBP25.36■■□□□ 1.65
HOMER3-201ENST00000221222 ANKS3Q6ZW76 656 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 DPH6Q7L8W6 267 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 TOP6BLQ8N6T0 577 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 LNX1Q8TBB1 728 aaPredicted RBP25.36■■□□□ 1.65
HOMER3-201ENST00000221222 FAM200AQ8TCP9 573 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 SEMA4DQ92854 862 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 IMPG2Q9BZV3 1241 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 TSPY26PQ9H489 355 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 NSUN3Q9H649 340 aaKnown RBP25.36■■□□□ 1.65
HOMER3-201ENST00000221222 RXFP1Q9HBX9 757 aa25.36■■□□□ 1.65
HOMER3-201ENST00000221222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.36■■□□□ 1.65
HOMER3-201ENST00000221222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.35■■□□□ 1.65
HOMER3-201ENST00000221222 BECN2A8MW95 431 aa25.35■■□□□ 1.65
HOMER3-201ENST00000221222 CREMQ03060 361 aa25.35■■□□□ 1.65
HOMER3-201ENST00000221222 AAK1Q2M2I8 961 aa25.35■■□□□ 1.65
HOMER3-201ENST00000221222 WDR72Q3MJ13 1102 aa25.35■■□□□ 1.65
HOMER3-201ENST00000221222 MIIPQ5JXC2 388 aa25.35■■□□□ 1.65
HOMER3-201ENST00000221222 FNIP2Q9P278 1114 aa25.35■■□□□ 1.65
HOMER3-201ENST00000221222 LIMA1Q9UHB6 759 aaKnown RBP25.35■■□□□ 1.65
HOMER3-201ENST00000221222 C2CD2LO14523 706 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 HUS1O60921 280 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 OAZ2O95190 189 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 YWHAHQ04917 246 aaPredicted RBP25.34■■□□□ 1.65
HOMER3-201ENST00000221222 CETN1Q12798 172 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 KRT31Q15323 416 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 PSMD5Q16401 504 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 VWA3BQ502W6 1294 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 ZNF667Q5HYK9 610 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 PRSS55Q6UWB4 352 aaPredicted RBP25.34■■□□□ 1.65
HOMER3-201ENST00000221222 TMEM86AQ8N2M4 240 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 SPATA18Q8TC71 538 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 NDST4Q9H3R1 872 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 MTRRQ9UBK8 725 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 L1RE1Q9UN81 338 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 TIMM13Q9Y5L4 95 aaPredicted RBP25.34■■□□□ 1.65
HOMER3-201ENST00000221222 BACE2Q9Y5Z0 518 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 BDP1A6H8Y1 2624 aa25.34■■□□□ 1.65
HOMER3-201ENST00000221222 H7C4K7 107 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 TBC1D4O60343 1298 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 LRRN2O75325 713 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 FAM163BP0C2L3 166 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 PRKCSHP14314 528 aaPredicted RBP25.33■■□□□ 1.65
HOMER3-201ENST00000221222 TNNC1P63316 161 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 NOP14P78316 857 aaKnown RBP25.33■■□□□ 1.65
HOMER3-201ENST00000221222 SOWAHAQ2M3V2 549 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 ADGRD2Q7Z7M1 963 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 PDCL2Q8N4E4 241 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 CCDC150Q8NCX0 1101 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 HLA-CQ95604 372 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 PPP2R3CQ969Q6 453 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 FAXDC2Q96IV6 333 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 PI4K2AQ9BTU6 479 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 EMILIN2Q9BXX0 1053 aa25.33■■□□□ 1.65
HOMER3-201ENST00000221222 COG5Q9UP83 839 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms