RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 GPAT2Q6NUI2 795 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 CYGBQ8WWM9 190 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 PKP3Q9Y446 797 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 CHD1O14646 1710 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 PLA2G4AP47712 749 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 XPO6Q96QU8 1125 aaKnown RBP18.69■□□□□ 0.58
EXTL3-201ENST00000220562 NT5C1AQ9BXI3 368 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.69■□□□□ 0.58
EXTL3-201ENST00000220562 C19orf81C9J6K1 198 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 NR3C2P08235 984 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 ITGA4P13612 1032 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 EFCAB12Q6NXP0 572 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 ADCK2Q7Z695 626 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 PAK5Q9P286 719 aa18.69■□□□□ 0.58
EXTL3-201ENST00000220562 RASA1P20936 1047 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 NEK2P51955 445 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 SPATA18Q8TC71 538 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 KRT35Q92764 455 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 FOPNLQ96NB1 174 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 BRD2P25440 801 aaKnown RBP18.68■□□□□ 0.58
EXTL3-201ENST00000220562 UGP2Q16851 508 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 CAPRIN2Q6IMN6 1127 aaKnown RBP18.68■□□□□ 0.58
EXTL3-201ENST00000220562 LVRNQ6Q4G3 990 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 JMJD4Q9H9V9 463 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 MAP3K10Q02779 954 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 MED21Q13503 144 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 EDRF1Q3B7T1 1238 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 FAM162AQ96A26 154 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 YIPF2Q9BWQ6 316 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 OSBPL8Q9BZF1 889 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 EFCAB14O75071 495 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 TMEM253P0C7T8 217 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 ETFBP38117 255 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 ST8SIA6P61647 398 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 C6orf10Q5SRN2 563 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 TBC1D19Q8N5T2 526 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 KLF6Q99612 283 aaPredicted RBP18.68■□□□□ 0.58
EXTL3-201ENST00000220562 C17orf80Q9BSJ5 609 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 CHORDC1Q9UHD1 332 aaPredicted RBP18.68■□□□□ 0.58
EXTL3-201ENST00000220562 AIM2O14862 343 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 GYPCP04921 128 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 TRIM28Q13263 835 aaKnown RBP18.68■□□□□ 0.58
EXTL3-201ENST00000220562 CLEC4FQ8N1N0 589 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 IPMKQ8NFU5 416 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 TMEM161AQ9NX61 479 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 LRRC74AQ0VAA2 488 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 EPC2Q52LR7 807 aa18.68■□□□□ 0.58
EXTL3-201ENST00000220562 RIN2Q8WYP3 895 aaPredicted RBP18.68■□□□□ 0.58
EXTL3-201ENST00000220562 ZNF512BQ96KM6 892 aaPredicted RBP18.68■□□□□ 0.58
EXTL3-201ENST00000220562 PSMD14O00487 310 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 TBC1D4O60343 1298 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 UPP2O95045 317 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 TCN1P20061 433 aaPredicted RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 AGGF1Q8N302 714 aaeCLIP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 CATSPERBQ9H7T0 1116 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 TUBE1Q9UJT0 475 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 RPS6KA5O75582 802 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 MTM1Q13496 603 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 DCAF6Q58WW2 860 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 GJD4Q96KN9 370 aaPredicted RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 NSMCE4AQ9NXX6 385 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ZNF229Q9UJW7 825 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 SLC30A1Q9Y6M5 507 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ACADSBP45954 432 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 NLRP11P59045 1033 aaKnown RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 CENPCQ03188 943 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 KLHDC7AQ5VTJ3 777 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 IER5Q5VY09 327 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 FBXW10Q5XX13 1052 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 TRAPPC11Q7Z392 1133 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ADCK1Q86TW2 530 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 STX19Q8N4C7 294 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 SHCBP1Q8NEM2 672 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ZNF263O14978 683 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 POLBP06746 335 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 HSPA1AP0DMV8 641 aaKnown RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 HSPA1BP0DMV9 641 aaKnown RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ZNF34Q8IZ26 560 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ACSF2Q96CM8 615 aaPredicted RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 THTPAQ9BU02 230 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 SELENONQ9NZV5 590 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 SPRP35270 261 aaPredicted RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 LAMB3Q13751 1172 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 FAM71DQ8N9W8 422 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ZIM3Q96PE6 472 aa18.67■□□□□ 0.58
EXTL3-201ENST00000220562 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
EXTL3-201ENST00000220562 DGKIO75912 1065 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 NPTXRO95502 500 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 C6orf222P0C671 652 aaPredicted RBP18.66■□□□□ 0.58
EXTL3-201ENST00000220562 KCNJ6P48051 423 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 PCYT1AP49585 367 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 PDK1Q15118 436 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 PRR5LQ6MZQ0 368 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 NUDT18Q6ZVK8 323 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 USP38Q8NB14 1042 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 ERP27Q96DN0 273 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 RSAD1Q9HA92 442 aa18.66■□□□□ 0.58
EXTL3-201ENST00000220562 TMEM120BA0PK00 339 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms