RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 FIGNQ5HY92 759 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 YTHDF3Q7Z739 585 aaKnown RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 APOBEC3FQ8IUX4 373 aaKnown RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 ZNF564Q8TBZ8 553 aaPredicted RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 GRID2IPA4D2P6 1211 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 TMEM247A6NEH6 219 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 TGFB3P10600 412 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 GBP1P32455 592 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 PMS2P54278 862 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 INHBCP55103 352 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 OXCT1P55809 520 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 SOX10P56693 466 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 RNASELQ05823 741 aaKnown RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 MIIPQ5JXC2 388 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 DNAJC24Q6P3W2 148 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 RHPN2Q8IUC4 686 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 ELMO3Q96BJ8 720 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 FAM49AQ9H0Q0 323 aaPredicted RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 ELP3Q9H9T3 547 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 RBAKQ9NYW8 714 aaPredicted RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 AGO2Q9UKV8 859 aaKnown RBP11.14□□□□□ -0.63
VPS18-201ENST00000220509 SNED1Q8TER0 1413 aa11.14□□□□□ -0.63
VPS18-201ENST00000220509 SLITRK3O94933 977 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 POLR2BP30876 1174 aaKnown RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 TFDP1Q14186 410 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 MAPK6Q16659 721 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 BSPRYQ5W0U4 402 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 TAOK1Q7L7X3 1001 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 ZNF354CQ86Y25 554 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 SMC1BQ8NDV3 1235 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 TMEM221A6NGB7 291 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 HSPA9P38646 679 aaKnown RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 LBRQ14739 615 aaKnown RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 CFAP157Q5JU67 520 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 HP1BP3Q5SSJ5 553 aaPredicted RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 C7orf31Q8N865 590 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 DNAJC19Q96DA6 116 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 ANKRD36BP1Q96IX9 119 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 CNOT10Q9H9A5 744 aaKnown RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 DUOX1Q9NRD9 1551 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 SYNJ2BP-COX16A0A087WUM0 186 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 FOXN3O00409 490 aaPredicted RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 P4HA1P13674 534 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 FECHP22830 423 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 ALDH3A1P30838 453 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 MSH2P43246 934 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 PRKCEQ02156 737 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 KIAA1755Q5JYT7 1200 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 SH2D4BQ5SQS7 431 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 C6orf183Q5T699 404 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 SLFN12LQ6IEE8 588 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 MOB2Q70IA6 237 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 CBWD2Q8IUF1 395 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 CLMNQ96JQ2 1002 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 NDNQ99608 321 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 OXCT2Q9BYC2 517 aaPredicted RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 COX16Q9P0S2 106 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 SUCLA2Q9P2R7 463 aaPredicted RBP11.13□□□□□ -0.63
VPS18-201ENST00000220509 ROBO3Q96MS0 1386 aa11.13□□□□□ -0.63
VPS18-201ENST00000220509 POC1B-GALNT4F8VUJ3 575 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 DGAT1O75907 488 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 NQO1P15559 274 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 ATP5DP30049 168 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 KCNJ1P48048 391 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 HADHQ16836 314 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 TATDN1Q6P1N9 297 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 GPD1LQ8N335 351 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 FBXO25Q8TCJ0 367 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 PSPC1Q8WXF1 523 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 CENPTQ96BT3 561 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 SLC10A4Q96EP9 437 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 FGFBP2Q9BYJ0 223 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 IKZF4Q9H2S9 585 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 MRPL47Q9HD33 250 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 PCMTD2Q9NV79 361 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 USP20Q9Y2K6 914 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 CCDC160A6NGH7 325 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 EIF3DO15371 548 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS18-201ENST00000220509 GGPS1O95749 300 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 KRT1P04264 644 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 PRLRP16471 622 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 DRD4P21917 467 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 KCNA3P22001 575 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 OSBPP22059 807 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 ZBTB17Q13105 803 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 ZNF571Q7Z3V5 609 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms