RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ANKK1Q8NFD2 765 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 DTX3LQ8TDB6 740 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 NACC2Q96BF6 587 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 LRRC37BQ96QE4 947 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 HSD17B14Q9BPX1 270 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 TLE6Q9H808 572 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 UTRNP46939 3433 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 MYH11P35749 1972 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 E9PBE3 544 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 MATN2O00339 956 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 FBP2O00757 339 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 PSMD10O75832 226 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 NR2F2P24468 414 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 VPS41P49754 854 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 CTTNQ14247 550 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 KCTD19Q17RG1 926 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 ASTE1Q2TB18 679 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 ACSBG2Q5FVE4 666 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 HGSNATQ68CP4 663 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 PATL1Q86TB9 770 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 FAM83AQ86UY5 434 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 BBS5Q8N3I7 341 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 SEC14L1Q92503 715 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 LBHD1Q9BQE6 289 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 LSM14BQ9BX40 385 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 AP1M1Q9BXS5 423 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 STK33Q9BYT3 514 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 CEP72Q9P209 647 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 ZNRF3Q9ULT6 936 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 RABGAP1Q9Y3P9 1069 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 FER1L6Q2WGJ9 1857 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 CES2O00748 559 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 PLA2G6O60733 806 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 RNASEH1O60930 286 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 VDRP11473 427 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 TMED10P49755 219 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 CCT8P50990 548 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 MAP3K10Q02779 954 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 DSTYKQ6XUX3 929 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 AGBL3Q8NEM8 1001 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 CKAP2Q8WWK9 683 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 SLC5A5Q92911 643 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 ARHGEF2Q92974 986 aaKnown RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 GRAMD1AQ96CP6 724 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 ZBED3Q96IU2 234 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-201ENST00000220429 TPK1Q9H3S4 243 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 ATAD3AQ9NVI7 634 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 AMACRQ9UHK6 382 aa14.38□□□□□ -0.11
GABPB1-201ENST00000220429 KCNK3O14649 394 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 CHMP2AO43633 222 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 TLR2O60603 784 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 CBFA2T3O75081 653 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 TPPPO94811 219 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 SLITRK3O94933 977 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 PTPN4P29074 926 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 DSG1Q02413 1049 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 MTFR1Q15390 333 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 C6orf183Q5T699 404 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 SYNCQ9H7C4 482 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 SCAF8Q9UPN6 1271 aaKnown RBP14.37□□□□□ -0.11
GABPB1-201ENST00000220429 CHKBQ9Y259 395 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 UTP11Q9Y3A2 253 aaKnown RBP14.37□□□□□ -0.11
GABPB1-201ENST00000220429 MRPL11Q9Y3B7 192 aaKnown RBP14.37□□□□□ -0.11
GABPB1-201ENST00000220429 VILLO15195 856 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 TIMM44O43615 452 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 STRNO43815 780 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 ADCY3O60266 1144 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 CPA3P15088 417 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 YARSP54577 528 aaKnown RBP14.37□□□□□ -0.11
GABPB1-201ENST00000220429 GFPT1Q06210 699 aaPredicted RBP14.37□□□□□ -0.11
GABPB1-201ENST00000220429 CXCL9Q07325 125 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 PPP2R5CQ13362 524 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 RINT1Q6NUQ1 792 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 IZUMO2Q6UXV1 221 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 ARHGAP27Q6ZUM4 889 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 FAM160B2Q86V87 743 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 LDHDQ86WU2 507 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 STMN2Q93045 179 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
GABPB1-201ENST00000220429 CENPOQ9BU64 300 aa14.37□□□□□ -0.11
GABPB1-201ENST00000220429 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 WNT10BO00744 389 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 ZBTB39O15060 712 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 TTI1O43156 1089 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 RXRGP48443 463 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 POLR2FP61218 127 aaKnown RBP14.36□□□□□ -0.11
GABPB1-201ENST00000220429 KCNH2Q12809 1159 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 SLC29A2Q14542 456 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 BMT2Q1RMZ1 405 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 TNFAIP8L3Q5GJ75 292 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 RSPH3Q86UC2 560 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 CCT7Q99832 543 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 USP29Q9HBJ7 922 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 TRPC7Q9HCX4 862 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms