RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FBXO28Q9NVF7 368 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 ITGB3P05106 788 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 TRPM8Q7Z2W7 1104 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 TAAR1Q96RJ0 339 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 ASPSCR1Q9BZE9 553 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 TADA2AO75478 443 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 MYL2P10916 166 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 CYP2C19P33261 490 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 HSD17B3P37058 310 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 MGAT5BQ3V5L5 792 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 EME1Q96AY2 570 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.25□□□□□ -0.135e-9■■■□□ 17.8
TGFBR3-201ENST00000212355 ALG6Q9Y672 507 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 FKBP9O95302 570 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 IL10P22301 178 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 SOAT1P35610 550 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 KCNB1Q14721 858 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 FKBP9P1Q75LS8 142 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 SAMD7Q7Z3H4 446 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 FAM162AQ96A26 154 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 FAM111AQ96PZ2 611 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 APOL2Q9BQE5 337 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 MAGEB5Q9BZ81 275 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 TUFT1Q9NNX1 390 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 SLC40A1Q9NP59 571 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 PKP3Q9Y446 797 aa14.25□□□□□ -0.13
TGFBR3-201ENST00000212355 ADCK1Q86TW2 530 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 LRRC34Q8IZ02 419 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 PSMC3IPQ9P2W1 217 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ABCC3O15438 1527 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 CDHR2Q9BYE9 1310 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 CCDC22O60826 627 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 RASA1P20936 1047 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 STAT4Q14765 748 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 TRIP10Q15642 601 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ALX1Q15699 326 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 SYTL3Q4VX76 610 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ZNF772Q68DY9 489 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 TMED8Q6PL24 325 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 SEPT8Q92599 483 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ARHGEF26Q96DR7 871 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 CYP4F12Q9HCS2 524 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 RASSF10A6NK89 507 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 PSMD14O00487 310 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 AP5Z1O43299 807 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 C6orf222P0C671 652 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 PCYT1AP49585 367 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 PODNQ7Z5L7 613 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 MFN1Q8IWA4 741 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 WWP1Q9H0M0 922 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 CHCHD3Q9NX63 227 aaKnown RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 NAB2Q15742 525 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 NBPF9Q3BBW0 867 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ZKSCAN4Q969J2 545 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 WNK4Q96J92 1243 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ZMAT2Q96NC0 199 aaKnown RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 OSBPL8Q9BZF1 889 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 LATS2Q9NRM7 1088 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 PLA2R1Q13018 1463 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 DDHD2O94830 711 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 RHOBTB3O94955 611 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ZRANB3Q5FWF4 1079 aa14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 ANGEL2Q5VTE6 544 aaKnown RBP14.24□□□□□ -0.13
TGFBR3-201ENST00000212355 PMPCBO75439 489 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 NCAM1P13591 858 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 MAP4P27816 1152 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 CENPAP49450 140 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 AARS2Q5JTZ9 985 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 SEMA4DQ92854 862 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 EPAS1Q99814 870 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 TARS2Q9BW92 718 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 CNOT7Q9UIV1 285 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 WDR19Q8NEZ3 1342 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 FAM47DPA6NHR8 397 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 LRRIQ3A6PVS8 624 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 MT-CO1P00395 513 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 RHBDL2Q9NX52 303 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 RFX3P48380 749 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 MANSC1Q9H8J5 431 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 ARHGEF40Q8TER5 1519 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 ARIH2O95376 493 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 OR1G1P47890 313 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 CTCFP49711 727 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 RRM2BQ7LG56 351 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 UBP1Q9NZI7 540 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 C3orf70A6NLC5 250 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 AGTP01019 485 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 CALCAP01258 141 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 USP38Q8NB14 1042 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 KCTD10Q9H3F6 313 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 OSGEPQ9NPF4 335 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 CDYLQ9Y232 598 aa14.23□□□□□ -0.13
TGFBR3-201ENST00000212355 ZCCHC18P0CG32 403 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 NNMTP40261 264 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 PKN3Q6P5Z2 889 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms