RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PRG3Q9Y2Y8 225 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 GMNCA6NCL1 334 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 MCF2LO15068 1137 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 RGS20O76081 388 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 GHRP10912 638 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 LSP1P33241 339 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 BCAR1P56945 870 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 FAM102AQ5T9C2 384 aaPredicted RBP12.76□□□□□ -0.37
CHPF2-201ENST00000035307 XRRA1Q6P2D8 792 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 RSPH3Q86UC2 560 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 SENP7Q9BQF6 1050 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 SNTG2Q9NY99 539 aa12.76□□□□□ -0.37
CHPF2-201ENST00000035307 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 SUN1O94901 812 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 MEA1Q16626 185 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 FIGNQ5HY92 759 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 LRRC31Q6UY01 552 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 EFCAB13Q8IY85 973 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 OR5B17Q8NGF7 314 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 BAP1Q92560 729 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 KRT35Q92764 455 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 ABHD16BQ9H3Z7 469 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 LCMT1Q9UIC8 334 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 EIF3DO15371 548 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 RALAP11233 206 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 YWHAEP62258 255 aaKnown RBP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 SEMA3FQ13275 785 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 SLMAPQ14BN4 828 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 ABHD15Q6UXT9 468 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 APTXQ7Z2E3 356 aaKnown RBP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 HNRNPLLQ8WVV9 542 aaKnown RBP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 PRMT1Q99873 361 aaKnown RBP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 A6NJR5 290 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 FANCGO15287 622 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 PRPSAP2O60256 369 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 PIAS1O75925 651 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 SLC4A1P02730 911 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 RGS2P41220 211 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 MARCKSL1P49006 195 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 ARSEP51690 589 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 PDIA2Q13087 525 aaKnown RBP12.75□□□□□ -0.37
CHPF2-201ENST00000035307 STMN2Q93045 179 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 CYFIP2Q96F07 1278 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 XPNPEP1Q9NQW7 623 aa12.75□□□□□ -0.37
CHPF2-201ENST00000035307 A0A0G2JND7 137 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 E2F8A0AVK6 867 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 A8MXQ7 604 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 PODXLO00592 558 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 TLR2O60603 784 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 CHRNA3P32297 505 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 WDR93Q6P2C0 686 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 KCNV1Q6PIU1 500 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 EPS8L3Q8TE67 593 aaKnown RBP12.74□□□□□ -0.37
CHPF2-201ENST00000035307 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 CHN1P15882 459 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 HSPA6P17066 643 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 GTF2H1P32780 548 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 MSH2P43246 934 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 C1orf131Q8NDD1 294 aaKnown RBP12.74□□□□□ -0.37
CHPF2-201ENST00000035307 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 ARHGAP39Q9C0H5 1083 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 SLITRK6Q9H5Y7 841 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 CCDC195A0A1B0GUA6 201 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 I3L4J1 428 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■■□□□ 11.9
CHPF2-201ENST00000035307 RPS6KA5O75582 802 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 STAG3L1P0CL83 205 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 MDH1P40925 334 aaKnown RBP12.74□□□□□ -0.37
CHPF2-201ENST00000035307 EFNA5P52803 228 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 PDE1BQ01064 536 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 CRHR2Q13324 411 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 FAXCQ5TGI0 409 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 PHLDB3Q6NSJ2 640 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 TEX2Q8IWB9 1127 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 SLC17A8Q8NDX2 589 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 MICAL1Q8TDZ2 1067 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 TRIM11Q96F44 468 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 ATXN7L3BQ96GX2 97 aa12.74□□□□□ -0.37
CHPF2-201ENST00000035307 CCDC160A6NGH7 325 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 KITP10721 976 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 IL9RQ01113 521 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 DEFB115Q30KQ5 88 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 C6orf118Q5T5N4 469 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 PRUNE1Q86TP1 453 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.73□□□□□ -0.371e-8■■■□□ 15.3
CHPF2-201ENST00000035307 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 FIS1Q9Y3D6 152 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 BAG2O95816 211 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms