RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TAF1DQ9H5J8 278 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 RSAD1Q9HA92 442 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 A0A087WUV0 522 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 DNAJC6O75061 913 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 HSPA4LO95757 839 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TMEM253P0C7T8 217 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ACO1P21399 889 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ARSEP51690 589 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 SFSWAPQ12872 951 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 PDIA2Q13087 525 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ITIH5Q86UX2 942 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 BCAS4Q8TDM0 211 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 UCMAQ8WVF2 138 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ULK4Q96C45 1275 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 HAUS8Q9BT25 410 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 SENP6Q9GZR1 1112 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 OLA1Q9NTK5 396 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 NOVA2Q9UNW9 492 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 FOXP2O15409 715 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ASMTLO95671 621 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TTC31Q49AM3 519 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 CELF3Q5SZQ8 465 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ERGIC2Q96RQ1 377 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 DDX47Q9H0S4 455 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 VPS11Q9H270 941 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 PACSIN2Q9UNF0 486 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 SLC4A7Q9Y6M7 1214 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 MTSS1O43312 755 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 CDH18Q13634 790 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 E2F5Q15329 346 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 FBXO47Q5MNV8 452 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 IZUMO3Q5VZ72 239 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 VSIG10LQ86VR7 867 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 NLGN2Q8NFZ4 835 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 FEZF2Q8TBJ5 459 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ZBTB18Q99592 522 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 METTL5Q9NRN9 209 aaKnown RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 NRCAMQ92823 1304 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 PI4K2BG5E9Z4 385 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 MBL2P11226 248 aaPredicted RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 BCAT1P54687 386 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 CYP24A1Q07973 514 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 NNTQ13423 1086 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 MOB2Q70IA6 237 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 PPM1NQ8N819 430 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 CCDC197Q8NCU1 140 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 CYP2W1Q8TAV3 490 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 EGFL8Q99944 293 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ATP9BO43861 1147 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 FBXO21O94952 628 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 F9P00740 461 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 UBA1P22314 1058 aaKnown RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 COPS2P61201 443 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 BEX3Q00994 111 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 PLD1Q13393 1074 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 IKBKEQ14164 716 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ZKSCAN8Q15776 578 aaPredicted RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 RASGRP2Q7LDG7 609 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ANKRD23Q86SG2 305 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ACOT1Q86TX2 421 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 KLHL11Q9NVR0 708 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 SNTG2Q9NY99 539 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ACKR2O00590 384 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 TMCC1O94876 653 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 SLITRK3O94933 977 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 CKMP06732 381 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 PCK1P35558 622 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 BOLA3Q53S33 107 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ZPBP2Q6X784 338 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 RSRC1Q96IZ7 334 aaKnown RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 SIGLEC1Q9BZZ2 1709 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ZNF541Q9H0D2 1346 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 HMGB1P1B2RPK0 211 aaPredicted RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 H0Y626 953 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ZNF177Q13360 481 aaPredicted RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ZBED8Q8IZ13 594 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 TTC30BQ8N4P2 665 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 C1orf131Q8NDD1 294 aaKnown RBP10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ENGASEQ8NFI3 743 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 EMILIN2Q9BXX0 1053 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 STK38LQ9Y2H1 464 aa10.87□□□□□ -0.67
NIPAL3-201ENST00000003912 ZMYM2Q9UBW7 1377 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 CASTOR2A6NHX0 329 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 SPDYE5A6NIY4 337 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 SEC31AO94979 1220 aaKnown RBP10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 RCN2Q14257 317 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 PHLDB3Q6NSJ2 640 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 ASB7Q9H672 318 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 WDCPQ9H6R7 721 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 DDIT4Q9NX09 232 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 IFT172Q9UG01 1749 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 RABGAP1LQ5R372 815 aa10.86□□□□□ -0.67
NIPAL3-201ENST00000003912 NT5DC4Q86YG4 428 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms