RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 TUBE1Q9UJT0 475 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 PCDHB12Q9Y5F1 795 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 MON2Q7Z3U7 1717 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 EXOC1LA0A1B0GW35 172 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 FAM170AA1A519 330 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CFAP69A5D8W1 941 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 DFFAO00273 331 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 ENC1O14682 589 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 FBXO21O94952 628 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 SLC4A1P02730 911 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 MCF2P10911 925 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 RAG1P15918 1043 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 INPP5BP32019 993 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 HARS2P49590 506 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 ALDH5A1P51649 535 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 BCAR1P56945 870 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 RPL10AP62906 217 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 ERVK-9P63128 1117 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 ERVK-24P63145 666 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 TROAPQ12815 778 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 NFIAQ12857 509 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 DHX34Q14147 1143 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 MFSD10Q14728 455 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 PCBP1Q15365 356 aaKnown RBP eCLIP4.47□□□□□ -1.69
CFTR-201ENST00000003084 GOLGA7BQ2TAP0 167 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 P3H1Q32P28 736 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 ACCSLQ4AC99 568 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 PREPLQ4J6C6 727 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 DDX53Q86TM3 631 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 METTL16Q86W50 562 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 NT5DC4Q86YG4 428 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CLEC10AQ8IUN9 316 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 LMNTD2Q8IXW0 634 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 SDCCAG3Q96C92 435 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 EEF2KMTQ96G04 330 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 SNF8Q96H20 258 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 RSRC1Q96IZ7 334 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 FMO2Q99518 471 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 ZBTB18Q99592 522 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 SEPT5Q99719 369 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.47□□□□□ -1.69
CFTR-201ENST00000003084 UNC93B1Q9H1C4 597 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 DHX35Q9H5Z1 703 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 TRIM45Q9H8W5 580 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 PRDM10Q9NQV6 1147 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 SMYD2Q9NRG4 433 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 NSMCE4AQ9NXX6 385 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 MYPNQ86TC9 1320 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 ADM5C9JUS6 153 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CASQ2O14958 399 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 FKTNO75072 461 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 HLA-DRAP01903 254 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 TRIM49P0CI25 452 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 TRIM49CP0CI26 452 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 LHX1P48742 406 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 GNGT1P63211 74 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 NNTQ13423 1086 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 RBBP5Q15291 538 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 BBS9Q3SYG4 887 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 APOBEC3HQ6NTF7 200 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 CATSPERGQ6ZRH7 1159 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 FBXO16Q8IX29 292 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 HPDLQ96IR7 371 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CGRRF1Q99675 332 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 TRIM54Q9BYV2 358 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 HMX1Q9NP08 348 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 ENTPD7Q9NQZ7 604 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 EEF2KO00418 725 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 OGTO15294 1046 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 BNIP3LO60238 219 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 SUN1O94901 812 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 JUNDP17535 347 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 NLRP11P59045 1033 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 SEC23AQ15436 765 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 TTC31Q49AM3 519 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 TAF2Q6P1X5 1199 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 EMBQ6PCB8 327 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 HERC6Q8IVU3 1022 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 USP13Q92995 863 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 MKL1Q969V6 931 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 KAZALD1Q96I82 304 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 UROC1Q96N76 676 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 TSPAN18Q96SJ8 248 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 EMILIN2Q9BXX0 1053 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 ABHD16BQ9H3Z7 469 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 Q9H521 79 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 NRBP1Q9UHY1 535 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 FKBPLQ9UIM3 349 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 ITGA11Q9UKX5 1188 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 PYCARDQ9ULZ3 195 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CAMTA1Q9Y6Y1 1673 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 FAM208AQ9UK61 1670 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 A0A087WUV0 522 aaPredicted RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 GPR25O00155 361 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 RASGRF2O14827 1237 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CYP26A1O43174 497 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CTIFO43310 598 aaKnown RBP4.47□□□□□ -1.69
CFTR-201ENST00000003084 URODP06132 367 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 CYP3A4P08684 503 aa4.47□□□□□ -1.69
CFTR-201ENST00000003084 FAM200BP0CF97 657 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms