RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Pdk2Q9JK42 407 aa15.45■□□□□ 0.06
Vcan-205ENSMUST00000159337 Lbhd1A0A087WPA0 259 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Lonrf1D3YY23 762 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Gcnt4E9Q649 455 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Gm20509G3UZF1 325 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Akap1O08715 857 aaKnown RBP15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Chil3O35744 398 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Icam1P13597 537 aaKnown RBP15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Sf3b2Q3UJB0 878 aaKnown RBP15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Oog4Q4G0C7 502 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Slitrk1Q810C1 696 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Elmo3Q8BYZ7 720 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 TdrpQ8C5P7 182 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Uba6Q8C7R4 1053 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Gprc5cQ8K3J9 440 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Slc18a1Q8R090 521 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Pcdhb4Q91XZ6 784 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Sun1Q9D666 913 aaKnown RBP15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Slc13a1Q9JHI4 594 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Anxa9Q9JHQ0 345 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Cnga3Q9JJZ8 631 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 XkQ9QXY7 446 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Speer3W4VSP1 261 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Arhgef10Q8C033 1345 aa15.44■□□□□ 0.06
Vcan-205ENSMUST00000159337 Fyb2A2A995 729 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Kbtbd2G3X9X1 623 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ccnb1P24860 430 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Drg1P32233 367 aaKnown RBP15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Erbb2P70424 1256 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Lmntd2Q0VET5 664 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Atp13a3Q5XF89 1219 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ptk6Q64434 451 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Col11a2Q64739 1736 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Prr18Q6PAN7 307 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Glra2Q7TNC8 452 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Q80ZQ3 298 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Osbpl2Q8BX94 484 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ttc39bQ8BYY4 617 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Lonp1Q8CGK3 949 aaKnown RBP15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Afg3l2Q8JZQ2 802 aaKnown RBP15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Pofut2Q8VHI3 429 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Rev1Q920Q2 1249 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ier5lQ99J55 406 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 MtrexQ9CZU3 1040 aaKnown RBP15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Actl7bQ9QY83 418 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Pus7B7ZNL8 666 aaKnown RBP15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ccdc13D3YV10 709 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Pcdh9F8VPK8 1237 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 MttpO08601 894 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Banf1O54962 89 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Dnase1l3O55070 310 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Myl1P05977 188 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 PrkchP23298 683 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Mmp13P33435 472 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Tulp2P46686 562 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Stip1Q60864 543 aaKnown RBP15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Spa17Q62252 149 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Brsk2Q69Z98 735 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ccdc117Q6PB51 277 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Chmp2bQ8BJF9 213 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Slc39a13Q8BZH0 361 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Tceal1Q921P9 165 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ptf1aQ9QX98 324 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Mtmr2Q9Z2D1 643 aa15.43■□□□□ 0.06
Vcan-205ENSMUST00000159337 Dhx15O35286 795 aaKnown RBP15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Klf1P46099 358 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Stmn2P55821 179 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 VcpQ01853 806 aaKnown RBP15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ppm1jQ149T7 507 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Brd9Q3UQU0 596 aaKnown RBP15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Acap2Q6ZQK5 770 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Dnajc6Q80TZ3 938 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Anapc5Q8BTZ4 740 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Il33Q8BVZ5 266 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Arfip2Q8K221 341 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Olfr809Q8VEX8 328 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Nrbp2Q91V36 499 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Spns2Q91VM4 549 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Fgd4Q91ZT5 766 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Atad3Q925I1 591 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Tmem206Q9D771 350 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Mrpl2Q9D773 306 aaKnown RBP15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 1700013H16RikQ9DAC5 291 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Igdcc4Q9EQS9 1252 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ddx24Q9ESV0 857 aaKnown RBP15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Cetn2Q9R1K9 172 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ifi207E9Q3L4 978 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 DldO08749 509 aaKnown RBP15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Mdm4O35618 489 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Ppargc1aO70343 797 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 S100a5P63084 93 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Pdp2Q504M2 532 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Cage1Q5IR70 849 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Grik1Q60934 836 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Map3k7Q62073 579 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Senp6Q6P7W0 1132 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 IqceQ6PCQ0 778 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 PicalmQ7M6Y3 660 aaKnown RBP15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Trip10Q8CJ53 603 aa15.42■□□□□ 0.06
Vcan-205ENSMUST00000159337 Bst2Q8R2Q8 172 aa15.42■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms