RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Hspa12bQ9CZJ2 685 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 4933436I01RikQ9D3T1 429 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tmed2Q9R0Q3 201 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ripor3A1L3T7 938 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tox2A2A472 547 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ddx43D3Z6P9 646 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Plekha5E9Q6H8 1269 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 GmnnO88513 206 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rpl6P47911 296 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 NfixP70257 488 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 McuQ3UMR5 350 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cep44Q5HZK1 386 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Naa15Q80UM3 865 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 ChfrQ810L3 664 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fndc9Q8BJN4 226 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Scfd1Q8BRF7 639 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cndp2Q9D1A2 475 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ccnt1Q9QWV9 724 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mcmdc2E9Q956 681 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm21833J3QPK1 500 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Serpinb8O08800 374 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ift81O35594 676 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sat2Q6P8J2 170 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zswim5Q80TC6 1188 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ints8Q80V86 995 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 LnpepQ8C129 1025 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Unc5aQ8K1S4 898 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 NpntQ91V88 561 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tom1l1Q923U0 474 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Xrcc4Q924T3 326 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Bbs5Q9CZQ9 341 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 M1apQ9Z0E1 529 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rap1gapA2ALS5 663 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Znf382B2RXC5 579 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Susd5G3UW60 619 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sgo2bJ3QMK1 1167 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Bdkrb2P32299 392 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 AdslP54822 484 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nfe2Q07279 373 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nlrc4Q3UP24 1024 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Smim15Q3UTD9 74 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Prrt3Q6PE13 971 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zfp189Q8BKP2 608 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 1700013H16RikQ9DAC5 291 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Serpini2Q9JK88 405 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ccr9Q9WUT7 369 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 PtproE9Q612 1226 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Lrrc32G3XA59 663 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 H2-EaP01904 255 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cyp17a1P27786 507 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Polr1bP70700 1135 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Kmt5bQ3U8K7 883 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ankrd13cQ3UX43 541 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Afap1l2Q5DTU0 825 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pabpc2Q62029 628 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Foxo6Q70KY4 559 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dlg1Q811D0 905 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tmtc4Q8BG19 741 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cog3Q8CI04 820 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Vmn1r213Q8R278 384 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tbc1d22aQ8R5A6 516 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Olfr474Q8VFC9 310 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ubtd1Q91WB7 227 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pcdha2Q91Y17 948 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cstf3Q99LI7 717 aaKnown RBP9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Klhl4B1AZR0 717 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm3676D3Z236 184 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm3248K7N721 186 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm21962L7N280 338 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Myo1aO88329 1043 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 FgrP14234 517 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Prl3d1P18121 224 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 AgrpP56473 131 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Card10P58660 1021 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tubgcp3P58854 905 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TdrkhQ80VL1 560 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Micu2Q8CD10 432 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 SpartQ8R1X6 671 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ccdc105Q9D4K7 499 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Prl8a8Q9DAS4 241 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 CoasyQ9DBL7 563 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gpr63Q9EQQ3 425 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cabp1Q9JLK7 227 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Asap1Q9QWY8 1147 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Phf2Q9WTU0 1096 aa9.38□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ccdc78D3Z5T1 437 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm6588E9Q3K0 461 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Slc9a3G3X939 829 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dgcr6O35347 198 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Hoxc13P50207 328 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pde1bQ01065 535 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zbtb5Q7TQG0 670 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Thoc5Q8BKT7 683 aaKnown RBP9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pcna-ps2A0A140T8V5 261 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm5936A2BG95 728 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm5640A3KG49 728 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fbxl18E9PYR1 771 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Kcnj15O88932 375 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ezh1P70351 747 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Slc8a1P70414 970 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms