RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Cep44Q5HZK1 386 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Stip1Q60864 543 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 OtoaQ8K561 1137 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ing3Q8VEK6 421 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Dynll2Q9D0M5 89 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Prr5lA2AVJ5 370 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 ItgaeQ60677 1167 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mettl25Q6NXH8 597 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Agr3Q8R3W7 165 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 TraipQ8VIG6 470 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Atp6v1b1Q91YH6 513 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Myh15E9Q264 1925 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Usp32F8VPZ3 1604 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21488A0A087WR99 222 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Cyp2e1Q05421 493 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Wdr41Q3UDP0 460 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Wdsub1Q9D0I6 474 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tbk1Q9WUN2 729 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Sdr16c6Q05A13 316 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Acot5Q6Q2Z6 421 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 ItchQ8C863 864 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 SprtnG3X912 497 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 GpiP06745 558 aaKnown RBP17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ndufaf2Q59J78 168 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Arhgef7Q9ES28 862 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Morc1Q9WVL5 950 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Hspa1bP17879 642 aaKnown RBP17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Pde6bP23440 856 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Dhx32Q8BZS9 744 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mageb3Q9D2H4 330 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Nr2c1Q505F1 590 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Arid5bQ8BM75 1188 aaKnown RBP17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Igf2bp3Q9CPN8 579 aaKnown RBP17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tm9sf1Q9DBU0 606 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Capn7Q9R1S8 813 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Zmym2Q9CU65 1376 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Egfl8Q6GUQ1 293 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tas2r131Q7M708 310 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Proser2Q8C5R2 471 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tmem232Q5K6N0 675 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Senp6Q6P7W0 1132 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Chmp2bQ8BJF9 213 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tph2Q8CGV2 488 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 DiabloQ9JIQ3 237 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Chd1P40201 1711 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Lnx1O70263 728 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ms4a2P20490 235 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Rab6bP61294 208 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gsdmc2Q2KHK6 480 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Prdm8Q8BZ97 687 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 HpdlQ8K248 371 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Pkp3Q9QY23 797 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Axin1O35625 863 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Trpc5osQ3UHV4 110 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tspyl5Q69ZB3 406 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Haus7Q8BKT8 364 aa17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mrpl50Q8VDT9 159 aaKnown RBP17.29■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mbd5B1AYB6 1498 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Capza2P47754 286 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ifit3Q64345 403 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Caap1Q8VDY9 356 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Kcnq5Q9JK45 933 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Slfn2Q9Z0I6 378 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 CltcQ68FD5 1675 aaKnown RBP17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 RbakQ8BQC8 711 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Acsl4Q9QUJ7 711 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Slc26a4Q9R155 780 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Cul9Q80TT8 1865 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 C130060K24RikG3UWA8 416 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gspt2Q149F3 632 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Slc22a3Q9WTW5 551 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ttll9A2APC3 461 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Zfy2P20662 777 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Aldh5a1Q8BWF0 523 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Clptm1Q8VBZ3 664 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fam32aQ9CR80 112 aaKnown RBP17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Phf2Q9WTU0 1096 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mroh2aD3Z750 1679 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Slc2a4P14142 509 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 CtifQ6PEE2 600 aaKnown RBP17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mmgt1Q8K273 131 aaKnown RBP17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Rgs2O08849 211 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Crabp2P22935 138 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Pim2Q62070 370 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 TfrcQ62351 763 aaKnown RBP17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Exoc3l4Q6DIA2 721 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mapk4Q6P5G0 583 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Elmo2Q8BHL5 732 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Chchd6Q91VN4 273 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Hspbp1Q99P31 357 aaKnown RBP17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Kctd14A0A0U1RNG7 287 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Samd11Q1RNF8 542 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Atxn7l3bQ3UD01 97 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gpr162Q3UN16 588 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Kbtbd4Q8R179 534 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Capn9Q9D805 690 aa17.28■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mucl2P02815 138 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Rbm46P86049 533 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ttbk2Q3UVR3 1243 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ttf2Q5NC05 1138 aa17.27■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms