RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Tmem65Q4VAE3 234 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Myef2Q8C854 591 aaKnown RBP17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 D630039A03RikQ8K0M7 236 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 SncaipQ99ME3 962 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Smyd3Q9CWR2 428 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Tmem81Q9D5K1 259 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ttc33Q9D6K7 262 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 TazI7HJS2 263 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Cst8P32766 142 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 PklrP53657 574 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ripk2P58801 539 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Tbc1d10aP58802 500 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 CyldQ80TQ2 952 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Q8BGC1 442 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ipo5Q8BKC5 1097 aaKnown RBP17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Taf5Q8C092 801 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Tmem161bQ8C2L6 487 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Mxra7Q9CZH7 178 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Scyl1Q9EQC5 806 aaKnown RBP17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 StrcQ8VIM6 1809 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 AspgA0JNU3 564 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gm13084A2A8N0 494 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gm15448F6PZL4 682 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gm8909G3UXE9 396 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 UrosP51163 265 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Psmc5P62196 406 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Grm2Q14BI2 872 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Fundc1Q9DB70 155 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 DmgdhQ9DBT9 869 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ttc6G3UYY4 1857 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gsta4P24472 222 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Tnni3P48787 211 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Nub1P54729 614 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Capn13Q3UW68 665 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Sugp1Q8CH02 643 aaKnown RBP17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Rilpl2Q99LE1 197 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Caln1Q9JJG7 219 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Mia3Q8BI84 1930 aa17.09■□□□□ 0.33
Trim28-201ENSMUST00000005705 Kcnn2P58390 839 aa17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 DeptorQ570Y9 409 aa17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 Grid1Q61627 1009 aa17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 Rbbp5Q8BX09 538 aaKnown RBP17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 Scrn2Q8VCA8 425 aa17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 PnkpQ9JLV6 522 aaKnown RBP17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 H2-OaQ9QWV1 250 aa17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 Fem1bQ9Z2G0 627 aa17.08■□□□□ 0.33
Trim28-201ENSMUST00000005705 Mageb2A2AHM0 380 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tada2bD3Z4Z0 420 aaKnown RBP17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Pitpnm1O35954 1243 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Pde4aO89084 844 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Vamp7P70280 220 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Pde1bQ01065 535 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Cdc14aQ6GQT0 603 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Znf879Q8BI99 563 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Slc7a14Q8BXR1 771 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Nme5Q99MH5 211 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Olig1Q9JKN5 260 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ccr10Q9JL21 362 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Dock2Q8C3J5 1828 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Zfp612A0A1D5RMC2 672 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gm4841E9QAA8 417 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rag1P15919 1040 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Sar1aP36536 198 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gstt2Q61133 244 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gigyf2Q6Y7W8 1291 aaKnown RBP17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 SrlQ7TQ48 910 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 N4bp3Q8C7U1 537 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ago2Q8CJG0 860 aaKnown RBP17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 DolkQ8R2Y3 534 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tmem68Q9D850 329 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Clec4aQ9QZ15 238 aa17.08■□□□□ 0.32
Trim28-201ENSMUST00000005705 Itpripl1A2ASA8 547 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Sept7O55131 436 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ces1cP23953 554 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Pabpn1lQ5XFR0 273 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 CbarpQ66L44 698 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Cntnap5cQ0V8T7 1305 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Oog1E9Q5G7 496 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ugt3a1Q3UP75 523 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ifnl2Q4VK74 193 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Msantd2Q6NZR2 559 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Slc9c1Q6UJY2 1175 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rhbdf2Q80WQ6 827 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Sfmbt1Q9JMD1 863 aa17.07■□□□□ 0.32
Trim28-201ENSMUST00000005705 Lrrc63A6H694 637 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Hmgb2P30681 210 aaKnown RBP17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rit2P70425 217 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gpd2Q64521 727 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Fam20aQ8CID3 541 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Dtnbp1Q91WZ8 352 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Pomgnt1Q91X88 660 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Vps36Q91XD6 386 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gm10436L7N1Y3 520 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Snx3O70492 162 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gjb1P28230 283 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Cap1P40124 474 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 SbdsP70122 250 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Znf746Q3U133 652 aa17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Myl6Q60605 151 aaKnown RBP17.06■□□□□ 0.32
Trim28-201ENSMUST00000005705 Ccdc80Q8R2G6 949 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms