RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ripk2P58801 539 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Rab6bP61294 208 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Trim43cP86449 446 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ppp4r3cQ3V0Y1 813 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Atp2a3Q64518 1038 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Zswim5Q80TC6 1188 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Znf579Q80VM4 562 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Pnpt1Q8K1R3 783 aaKnown RBP9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 ChiaQ91XA9 473 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Cdk9Q99J95 372 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Slc39a3Q99K24 317 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Nme5Q99MH5 211 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Med7Q9CZB6 233 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Fam187aQ9D3R5 417 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Prl2b1Q9DAZ2 228 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Txnrd2Q9JLT4 524 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Myh13B1AR69 1938 aa9.96□□□□□ -0.81
Col6a1-201ENSMUST00000001147 Ccdc175E9PVB3 822 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Gm5689F6Y2A6 97 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Grik5Q61626 979 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Gga2Q6P5E6 603 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Dars2Q8BIP0 653 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 EtnpplQ8BWU8 499 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Basp1Q91XV3 226 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ivns1abpQ920Q8 642 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Bnip3lQ9Z2F7 218 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Plcg1Q62077 1302 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Abcb11Q9QY30 1321 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Thsd7aQ69ZU6 1645 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Vwa5b1A9Z1V5 1215 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Spata31d1dE9Q5W2 1247 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 GclmO09172 274 aaKnown RBP9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tlk2O55047 718 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ets2P15037 468 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tmem165P52875 323 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Epb41l4aP52963 686 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 RenbpP82343 430 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 InscQ3HNM7 579 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zfp953Q3UPV7 304 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zfp957Q3UT76 567 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Srrm1Q52KI8 946 aaKnown RBP9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Cd180Q62192 661 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tas2r109Q7M707 316 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 PrcpQ7TMR0 491 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tcaf1Q8BNE1 924 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Uba3Q8C878 462 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Grhl1Q921D9 618 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Smyd3Q9CWR2 428 aa9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Drg2Q9QXB9 364 aaKnown RBP9.96□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Rabgap1A2AWA9 1064 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Sh2d4bA6X942 431 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Mmp15O54732 657 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Sar1aP36536 198 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Cap1P40124 474 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Pdcd2P46718 343 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 PklrP53657 574 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 TdgP56581 421 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Mark2Q05512 776 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Camta2Q80Y50 1208 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tarsl2Q8BLY2 790 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Lrrc4cQ8C031 640 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Pcdhb2Q91Y00 799 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ddx56Q9D0R4 546 aaKnown RBP9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Syap1Q9D5V6 365 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Cyp39a1Q9JKJ9 470 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Lypla2Q9WTL7 231 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Fam47eD3YWC7 402 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 4930523C07RikE9Q2T4 99 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zfy1P10925 782 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Rpl7aP12970 266 aaKnown RBP9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 HalP35492 657 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 SftpdP50404 374 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Gspt2Q149F3 632 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 MyrflQ3UN70 904 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Znf354cQ571J5 560 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Myl6Q60605 151 aaKnown RBP9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Nsun6Q7TS68 476 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Arhgap29Q8CGF1 1266 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Olfr397Q8VEZ6 315 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ttc1Q91Z38 292 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Nt5c3aQ9D020 331 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tspan17Q9D7W4 270 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Prmt2Q9R144 448 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zscan4-ps1A0A1C7CYV3 506 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zscan4dA7KBS4 506 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Gm28043E0CXC2 719 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ndufs6P52503 116 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Gtf2bP62915 316 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 NxnP97346 435 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zscan4fQ3URS2 506 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ahcyl2Q68FL4 613 aaKnown RBP9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Q6GQV0 436 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Msantd2Q6NZR2 559 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zscan4cQ80VJ6 506 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Vmn2r43Q80Z08 845 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Pih1h3bQ8C6P5 218 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ephb1Q8CBF3 984 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tmem132cQ8CEF9 1099 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Rmdn1Q9DCV4 305 aa9.95□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Strn3Q9ERG2 796 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms