RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C CKS1P20486 150 aaKnown RBP2.54□□□□□ -2
SSN8YNL025C YCR043CP25361 127 aa2.54□□□□□ -2
SSN8YNL025C ERG2P32352 222 aa2.54□□□□□ -2
SSN8YNL025C HYM1P32464 399 aa2.54□□□□□ -2
SSN8YNL025C SFK1P35735 353 aa2.54□□□□□ -2
SSN8YNL025C YBR062CP38239 180 aa2.54□□□□□ -2
SSN8YNL025C YER186CP40101 306 aa2.54□□□□□ -2
SSN8YNL025C RIO2P40160 425 aaKnown RBP2.54□□□□□ -2
SSN8YNL025C PAC10P48363 199 aa2.54□□□□□ -2
SSN8YNL025C RPS12P48589 143 aaKnown RBP2.54□□□□□ -2
SSN8YNL025C AIF1P52923 378 aa2.54□□□□□ -2
SSN8YNL025C TSA2Q04120 196 aa2.54□□□□□ -2
SSN8YNL025C SCW10Q04951 389 aa2.54□□□□□ -2
SSN8YNL025C MRX8Q05473 314 aa2.54□□□□□ -2
SSN8YNL025C YLR281CQ05863 155 aa2.54□□□□□ -2
SSN8YNL025C YHC1Q05900 231 aaKnown RBP2.54□□□□□ -2
SSN8YNL025C TIR4Q12218 487 aaPredicted RBP2.54□□□□□ -2
SSN8YNL025C YOR020W-AQ3E824 90 aa2.54□□□□□ -2
SSN8YNL025C KTI11Q3E840 82 aa2.54□□□□□ -2
SSN8YNL025C YHR214C-EQ8TGK0 99 aa2.54□□□□□ -2
SSN8YNL025C MON2P48563 1636 aaPredicted RBP2.53□□□□□ -2
SSN8YNL025C ADH3P07246 375 aaKnown RBP2.53□□□□□ -2
SSN8YNL025C DDI2P0CH63 225 aa2.53□□□□□ -2
SSN8YNL025C DDI3P0CH64 225 aa2.53□□□□□ -2
SSN8YNL025C RPL30P14120 105 aaKnown RBP2.53□□□□□ -2
SSN8YNL025C BGL2P15703 313 aaKnown RBP2.53□□□□□ -2
SSN8YNL025C PHO13P19881 312 aa2.53□□□□□ -2
SSN8YNL025C YCR022CP25620 114 aa2.53□□□□□ -2
SSN8YNL025C SEC17P32602 292 aa2.53□□□□□ -2
SSN8YNL025C SDH3P33421 198 aa2.53□□□□□ -2
SSN8YNL025C AVT2P39981 480 aa2.53□□□□□ -2
SSN8YNL025C GVP36P40531 326 aaKnown RBP2.53□□□□□ -2
SSN8YNL025C ARP3P47117 449 aaKnown RBP2.53□□□□□ -2
SSN8YNL025C TDA4P47153 279 aa2.53□□□□□ -2
SSN8YNL025C YGL262WP53054 175 aa2.53□□□□□ -2
SSN8YNL025C YMR099CQ03161 297 aaKnown RBP2.53□□□□□ -2
SSN8YNL025C THI74Q04083 370 aa2.53□□□□□ -2
SSN8YNL025C YPR114WQ06107 315 aa2.53□□□□□ -2
SSN8YNL025C ATG39Q06159 398 aa2.53□□□□□ -2
SSN8YNL025C MIM1Q08176 113 aa2.53□□□□□ -2
SSN8YNL025C MSA1Q08471 629 aa2.53□□□□□ -2
SSN8YNL025C IES4Q08561 116 aa2.53□□□□□ -2
SSN8YNL025C YPS3Q12303 508 aa2.53□□□□□ -2
SSN8YNL025C PRR2Q12310 699 aa2.53□□□□□ -2
SSN8YNL025C JID1Q12350 301 aa2.53□□□□□ -2
SSN8YNL025C YNL277W-AQ3E7Z0 62 aa2.53□□□□□ -2
SSN8YNL025C TDA8Q6B2U8 126 aa2.53□□□□□ -2
SSN8YNL025C YLR462WO13556 202 aa2.52□□□□□ -2.01
SSN8YNL025C RPS14AP06367 137 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C HIS3P06633 220 aa2.52□□□□□ -2.01
SSN8YNL025C YFL068WP0CX99 160 aa2.52□□□□□ -2.01
SSN8YNL025C YLL066W-AP0CY00 160 aa2.52□□□□□ -2.01
SSN8YNL025C YLL067W-AP0CY01 160 aa2.52□□□□□ -2.01
SSN8YNL025C MRS3P10566 314 aa2.52□□□□□ -2.01
SSN8YNL025C PET9P18239 318 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C CCA1P21269 546 aa2.52□□□□□ -2.01
SSN8YNL025C RSA4P25382 515 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C ATS1P31386 333 aa2.52□□□□□ -2.01
SSN8YNL025C BAT1P38891 393 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C RPS14BP39516 138 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C YEL075CP39972 122 aa2.52□□□□□ -2.01
SSN8YNL025C AVT6P40074 448 aa2.52□□□□□ -2.01
SSN8YNL025C PRM5P40476 318 aa2.52□□□□□ -2.01
SSN8YNL025C YJL213WP40896 331 aa2.52□□□□□ -2.01
SSN8YNL025C NCA3P46955 337 aa2.52□□□□□ -2.01
SSN8YNL025C RPE1P46969 238 aa2.52□□□□□ -2.01
SSN8YNL025C TTI2P47168 421 aa2.52□□□□□ -2.01
SSN8YNL025C ALG9P53868 555 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C ACT1P60010 375 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C DML1Q03652 475 aa2.52□□□□□ -2.01
SSN8YNL025C AIM36Q03798 255 aa2.52□□□□□ -2.01
SSN8YNL025C SLD7Q08457 257 aa2.52□□□□□ -2.01
SSN8YNL025C YOR376WQ08900 122 aa2.52□□□□□ -2.01
SSN8YNL025C FSF1Q12029 327 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C THP3Q12049 470 aaKnown RBP2.52□□□□□ -2.01
SSN8YNL025C YOR342CQ12182 319 aa2.52□□□□□ -2.01
SSN8YNL025C YLR099W-AQ3E798 87 aa2.52□□□□□ -2.01
SSN8YNL025C YPL229WQ99395 206 aa2.52□□□□□ -2.01
SSN8YNL025C TRM732Q03496 1420 aa2.51□□□□□ -2.01
SSN8YNL025C RPL15AP05748 204 aaKnown RBP2.51□□□□□ -2.01
SSN8YNL025C CBP6P07253 162 aaPredicted RBP2.51□□□□□ -2.01
SSN8YNL025C TIR1P10863 254 aa2.51□□□□□ -2.01
SSN8YNL025C CPR1P14832 162 aaKnown RBP2.51□□□□□ -2.01
SSN8YNL025C SRP21P32342 167 aa2.51□□□□□ -2.01
SSN8YNL025C SMP1P38128 452 aa2.51□□□□□ -2.01
SSN8YNL025C YBR220CP38318 560 aa2.51□□□□□ -2.01
SSN8YNL025C TEM1P38987 245 aa2.51□□□□□ -2.01
SSN8YNL025C YIL012WP40551 113 aa2.51□□□□□ -2.01
SSN8YNL025C STB1P42845 420 aa2.51□□□□□ -2.01
SSN8YNL025C SKI6P46948 246 aaPredicted RBP2.51□□□□□ -2.01
SSN8YNL025C GPI2P46961 280 aa2.51□□□□□ -2.01
SSN8YNL025C YGL260WP53056 76 aa2.51□□□□□ -2.01
SSN8YNL025C YGR015CP53208 328 aa2.51□□□□□ -2.01
SSN8YNL025C VPS28Q02767 242 aa2.51□□□□□ -2.01
SSN8YNL025C YDR391CQ04170 232 aa2.51□□□□□ -2.01
SSN8YNL025C LPP1Q04396 274 aa2.51□□□□□ -2.01
SSN8YNL025C GRH1Q04410 372 aaKnown RBP2.51□□□□□ -2.01
SSN8YNL025C PAL1Q05518 499 aaKnown RBP2.51□□□□□ -2.01
SSN8YNL025C MCH1Q07376 486 aa2.51□□□□□ -2.01
SSN8YNL025C YLR118CQ12354 227 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms