RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NOMO3P69849 1222 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 FASTKD3Q14CZ7 662 aaKnown RBP14.67□□□□□ -0.06
PHGDH-233ENST00000642021 TMED2Q15363 201 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ARHGEF16Q5VV41 709 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 KAZNQ674X7 775 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 SWSAP1Q6NVH7 229 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 MIS18BP1Q6P0N0 1132 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ECHDC2Q86YB7 292 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ADAM33Q9BZ11 813 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 HAPLN2Q9GZV7 340 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 KIF9Q9HAQ2 790 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ATP6V0A4Q9HBG4 840 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 RXFP1Q9HBX9 757 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ARHGEF3Q9NR81 526 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
PHGDH-233ENST00000642021 UTRNP46939 3433 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 GSTTP1A0A1W2PQM5 241 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ZC3H11AO75152 810 aaKnown RBP eCLIP14.67□□□□□ -0.06
PHGDH-233ENST00000642021 APBA3O96018 575 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 GARTP22102 1010 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 RPL7AP62424 266 aaKnown RBP14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ZBTB41Q5SVQ8 909 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 TMEM270Q6UE05 265 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 CRELD2Q6UXH1 353 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ASRGL1Q7L266 308 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 GSTA5Q7RTV2 222 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 USP37Q86T82 979 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ZBTB45Q96K62 511 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-233ENST00000642021 PAIP2Q9BPZ3 127 aaKnown RBP14.67□□□□□ -0.06
PHGDH-233ENST00000642021 DNPEPQ9ULA0 475 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 STK38LQ9Y2H1 464 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 ZNF541Q9H0D2 1346 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 WDR46O15213 610 aaKnown RBP14.66□□□□□ -0.06
PHGDH-233ENST00000642021 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
PHGDH-233ENST00000642021 ALADP13716 330 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 MYO1EQ12965 1108 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 BAATQ14032 418 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-233ENST00000642021 MTFR1Q15390 333 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 ARHGEF18Q6ZSZ5 1173 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 ZNF677Q86XU0 584 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 RELL1Q8IUW5 271 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 KATNAL2Q8IYT4 538 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 ABRAQ8N0Z2 381 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 TACO1Q9BSH4 297 aaKnown RBP14.66□□□□□ -0.06
PHGDH-233ENST00000642021 EBF2Q9HAK2 575 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 NKIRAS1Q9NYS0 192 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 PSTPIP1O43586 416 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 RGS20O76081 388 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 ANP32DO95626 131 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 CLDN10P78369 228 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 STAT4Q14765 748 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 WDR44Q5JSH3 913 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 PLEKHA7Q6IQ23 1121 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 NLRX1Q86UT6 975 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 L3MBTL3Q96JM7 780 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-233ENST00000642021 SAYSD1Q9NPB0 183 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 ZNF277Q9NRM2 450 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-233ENST00000642021 ARHGAP28Q9P2N2 729 aa14.66□□□□□ -0.06
PHGDH-233ENST00000642021 EXTL3O43909 919 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 MAP3K10Q02779 954 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 NFX1Q12986 1120 aaKnown RBP14.65□□□□□ -0.06
PHGDH-233ENST00000642021 CAPN12Q6ZSI9 719 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 VSIG10LQ86VR7 867 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 CCDC60Q8IWA6 550 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-233ENST00000642021 ZCCHC9Q8N567 271 aaKnown RBP14.65□□□□□ -0.06
PHGDH-233ENST00000642021 GBP7Q8N8V2 638 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-233ENST00000642021 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-233ENST00000642021 TRIM11Q96F44 468 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 FNBP1Q96RU3 617 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 PITPNM3Q9BZ71 974 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 C17orf75Q9HAS0 396 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 DONSONQ9NYP3 566 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 GRID1Q9ULK0 1009 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 PCDHB4Q9Y5E5 795 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 ASMTLO95671 621 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 GNA15P30679 374 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 PIK3CAP42336 1068 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 CUL2Q13617 745 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 PSMD6Q15008 389 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 TXNRD3NBQ6F5E7 133 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 EXD1Q8NHP7 514 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 NSMCE1Q8WV22 266 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 ACSF2Q96CM8 615 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-233ENST00000642021 POLR3FQ9H1D9 316 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-233ENST00000642021 SLCO1B3Q9NPD5 702 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 KLHL14Q9P2G3 628 aa14.65□□□□□ -0.06
PHGDH-233ENST00000642021 FAM47DPA6NHR8 397 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 LIASO43766 372 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 NR3C2P08235 984 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 LIG4P49917 911 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 BPIFB4P59827 614 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 STRN3Q13033 797 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 DNAJC3Q13217 504 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 SEZ6Q53EL9 994 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 MFSD7Q6UXD7 560 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 FAM83AQ86UY5 434 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 TRABD2AQ86V40 505 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
PHGDH-233ENST00000642021 FLAD1Q8NFF5 587 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms