RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TPRG1Q6ZUI0 275 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 GLYCTKQ8IVS8 523 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 MCPH1Q8NEM0 835 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 URGCPQ8TCY9 931 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 PRPF31Q8WWY3 499 aaKnown RBP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 ATRIPQ8WXE1 791 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 PSPC1Q8WXF1 523 aaKnown RBP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 PGBD4Q96DM1 585 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 NLRP4Q96MN2 994 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 JPH2Q9BR39 696 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 REEP2Q9BRK0 252 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 KIFC3Q9BVG8 833 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 NXF3Q9H4D5 531 aaKnown RBP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 HEBP1Q9NRV9 189 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 SEMA4GQ9NTN9 838 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 ADAM28Q9UKQ2 775 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 COL4A3BPQ9Y5P4 624 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 SCN1AP35498 2009 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 PCDH15Q96QU1 1955 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-225ENST00000641720 MYMKA6NI61 221 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 PTGESO14684 152 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 CCL16O15467 120 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 MOSPD3O75425 235 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 CHRNB1P11230 501 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 CASP1P29466 404 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 OR1G1P47890 313 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 SATB1Q01826 763 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 ADCY1Q08828 1119 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 SRSF5Q13243 272 aaKnown RBP8.11□□□□□ -1.11
PHGDH-225ENST00000641720 LPAL2Q16609 132 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 USP41Q3LFD5 358 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 TANGO2Q6ICL3 276 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 MTSS1LQ765P7 747 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 SRGAP1Q7Z6B7 1085 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 MAP4K3Q8IVH8 894 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 FMR1NBQ8N0W7 255 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-225ENST00000641720 KCTD17Q8N5Z5 321 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 IQUBQ8NA54 791 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 ENGASEQ8NFI3 743 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 RABGGTAQ92696 567 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 DNASE1L2Q92874 299 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 DNAJC19Q96DA6 116 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 SCLT1Q96NL6 688 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 INO80BQ9C086 356 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-225ENST00000641720 KBTBD4Q9NVX7 518 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 DPP7Q9UHL4 492 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 SERTAD1Q9UHV2 236 aa8.11□□□□□ -1.11
PHGDH-225ENST00000641720 SHROOM3Q8TF72 1996 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-225ENST00000641720 LRRIQ4A6NIV6 560 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 SFI1A8K8P3 1242 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
PHGDH-225ENST00000641720 NR1I2O75469 434 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 KIF4AO95239 1232 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 EDN1P05305 212 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 KRT18P05783 430 aaKnown RBP8.1□□□□□ -1.11
PHGDH-225ENST00000641720 PROS1P07225 676 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 C8AP07357 584 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 SLFN14P0C7P3 912 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 SRGAP2CP0DJJ0 459 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 CEBPBP17676 345 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 ARF4P18085 180 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-225ENST00000641720 RFX1P22670 979 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 CCR2P41597 374 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 SYKP43405 635 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 DNM2P50570 870 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 ZNF131P52739 623 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 PTENP60484 403 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 PFKPQ01813 784 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 MBTD1Q05BQ5 628 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 FAM160A1Q05DH4 1040 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 RAB33AQ14088 237 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 CDCA2Q69YH5 1023 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-225ENST00000641720 KRBA2Q6ZNG9 492 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 DYMQ7RTS9 669 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 EXOC8Q8IYI6 725 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 CELF5Q8N6W0 485 aaKnown RBP8.1□□□□□ -1.11
PHGDH-225ENST00000641720 RNF149Q8NC42 400 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 TCP11Q8WWU5 503 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 DDX12PQ92771 950 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 KIFAP3Q92845 792 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 CPB2Q96IY4 423 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 FGFBP2Q9BYJ0 223 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 TRIM9Q9C026 710 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 BLZF1Q9H2G9 400 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 TNMDQ9H2S6 317 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 CUEDC2Q9H467 287 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 TRPV5Q9NQA5 729 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 ANGPTL2Q9UKU9 493 aa8.1□□□□□ -1.11
PHGDH-225ENST00000641720 TP53BP1Q12888 1972 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-225ENST00000641720 FRMD3A2A2Y4 597 aa8.09□□□□□ -1.11
PHGDH-225ENST00000641720 GOLGA6L4A6NEF3 574 aa8.09□□□□□ -1.11
PHGDH-225ENST00000641720 TTLL13PA6NNM8 815 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms