RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 DCAF17Q5H9S7 520 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 PLPP4Q5VZY2 271 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 WDR49Q8IV35 697 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 CD302Q8IX05 232 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 RNF168Q8IYW5 571 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 VPS52Q8N1B4 723 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 BEST2Q8NFU1 509 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 RSPH1Q8WYR4 309 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 TCF25Q9BQ70 676 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 DERAQ9Y315 318 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 TIMM13Q9Y5L4 95 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-222ENST00000640634 C5orf42Q9H799 3197 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 TSC2P49815 1807 aa11.81□□□□□ -0.52
SCARB2-222ENST00000640634 hCG_2014768A0A024R1R8 64 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 TLDC2A0PJX2 215 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 ANO9A1A5B4 782 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 BICDL2A1A5D9 508 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 PIRO00625 290 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 PEX14O75381 377 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 VNN1O95497 513 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CST3P01034 146 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 KRT19P08727 400 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CYP3A5P20815 502 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 TKTP29401 623 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CA8P35219 290 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 FAM171A1Q5VUB5 890 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 GPR153Q6NV75 609 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 PRSS55Q6UWB4 352 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 TRAPPC11Q7Z392 1133 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 SYAP1Q96A49 352 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 ZBP1Q9H171 429 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 TLR9Q9NR96 1032 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 SAMSN1Q9NSI8 373 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 AGAP1Q9UPQ3 857 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 MTCH2Q9Y6C9 303 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 SLC16A3O15427 465 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 EPB41P11171 864 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 RPL17P18621 184 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 PPP1R2P41236 205 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CLDN10P78369 228 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 POU5F1Q01860 360 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CCDC85BQ15834 202 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 DCLRE1AQ6PJP8 1040 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 DDX53Q86TM3 631 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 RBM23Q86U06 439 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CEP57Q86XR8 500 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 CNOT6LQ96LI5 555 aaKnown RBP11.8□□□□□ -0.52
SCARB2-222ENST00000640634 UROC1Q96N76 676 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 ENTPD7Q9NQZ7 604 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 ANO10Q9NW15 660 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 NUB1Q9Y5A7 615 aa11.8□□□□□ -0.52
SCARB2-222ENST00000640634 SF3B1O75533 1304 aaKnown RBP eCLIP11.79□□□□□ -0.524e-6■■■■■ 139.6
SCARB2-222ENST00000640634 TMEM189-UBE2V1I3L0A0 370 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 FSCN2O14926 492 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 PER2O15055 1255 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 HCRTO43612 131 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 TNNC2P02585 160 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 C4BPAP04003 597 aaKnown RBP11.79□□□□□ -0.52
SCARB2-222ENST00000640634 FOSL2P15408 326 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 LILRA4P59901 499 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 MYL6P60660 151 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 KRT17Q04695 432 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 BIRC3Q13489 604 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 PTPN14Q15678 1187 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 CCDC40Q4G0X9 1142 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 TCERG1LQ5VWI1 586 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 RSPO2Q6UXX9 243 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-222ENST00000640634 INTS8Q75QN2 995 aaKnown RBP11.79□□□□□ -0.52
SCARB2-222ENST00000640634 SV2AQ7L0J3 742 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 TMC7Q7Z402 723 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 GLYCTKQ8IVS8 523 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 SLC35C1Q96A29 364 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 MRPL38Q96DV4 380 aaKnown RBP11.79□□□□□ -0.52
SCARB2-222ENST00000640634 ANKRD36BP1Q96IX9 119 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 CEP63Q96MT8 703 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 PI4K2AQ9BTU6 479 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 MKNK1Q9BUB5 465 aa11.79□□□□□ -0.52
SCARB2-222ENST00000640634 ARMCX3Q9UH62 379 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-222ENST00000640634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.78□□□□□ -0.52
SCARB2-222ENST00000640634 MAPK13O15264 365 aa11.78□□□□□ -0.52
SCARB2-222ENST00000640634 ADAM12O43184 909 aa11.78□□□□□ -0.52
SCARB2-222ENST00000640634 XPOTO43592 962 aaKnown RBP11.78□□□□□ -0.52
SCARB2-222ENST00000640634 SOD2P04179 222 aa11.78□□□□□ -0.52
SCARB2-222ENST00000640634 KRT13P13646 458 aa11.78□□□□□ -0.52
SCARB2-222ENST00000640634 RPL9P32969 192 aaKnown RBP11.78□□□□□ -0.52
SCARB2-222ENST00000640634 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms