RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 DRAP1Q14919 205 aaPredicted RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 NAB2Q15742 525 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 WDR72Q3MJ13 1102 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 PAN2Q504Q3 1202 aaKnown RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 SFMBT2Q5VUG0 894 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 FAM117BQ6P1L5 589 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 PDXDC1Q6P996 788 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 PSRC1Q6PGN9 363 aaPredicted RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 SCARA5Q6ZMJ2 495 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 ENOSF1Q7L5Y1 443 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 CRIPAKQ8N1N5 446 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 LRRC52Q8N7C0 313 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 TOP1MTQ969P6 601 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 DDX27Q96GQ7 796 aaKnown RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 FAM81BQ96LP2 452 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF560Q96MR9 790 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 KREMEN1Q96MU8 473 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 UROC1Q96N76 676 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 MMS19Q96T76 1030 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 MRPL9Q9BYD2 267 aaKnown RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 NIF3L1Q9GZT8 377 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 ABHD10Q9NUJ1 306 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 TBC1D13Q9NVG8 400 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 ZNHIT6Q9NWK9 470 aaKnown RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 SCN5AQ14524 2016 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 F8VZ95 297 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 FOXN3O00409 490 aaPredicted RBP9.4□□□□□ -0.9
HLA-B-258ENST00000640615 DGKIO75912 1065 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 GFPT2O94808 682 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 DDHD2O94830 711 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
HLA-B-258ENST00000640615 WEE2P0C1S8 567 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 PNMA6AP0CW24 399 aaPredicted RBP9.4□□□□□ -0.9
HLA-B-258ENST00000640615 KRT5P13647 590 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 SOX5P35711 763 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 USP8P40818 1118 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 TAF6P49848 677 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 JAM2P57087 298 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 ARID5AQ03989 594 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 ASIC2Q16515 512 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 UPP1Q16831 310 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 SV2CQ496J9 727 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 TMEM240Q5SV17 173 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 DCLRE1AQ6PJP8 1040 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 TMCO2Q7Z6W1 182 aaPredicted RBP9.4□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF280BQ86YH2 543 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 LRRC8AQ8IWT6 810 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 TDHQ8IZJ6 230 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 RSPH1Q8WYR4 309 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 TRIM44Q96DX7 344 aaPredicted RBP9.4□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF830Q96NB3 372 aaPredicted RBP9.4□□□□□ -0.9
HLA-B-258ENST00000640615 PANX2Q96RD6 677 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 DNAJC7Q99615 494 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 ARID3AQ99856 593 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.4□□□□□ -0.93e-7■■□□□ 12.7
HLA-B-258ENST00000640615 PAAF1Q9BRP4 392 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 VRTNQ9H8Y1 702 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 MYO6Q9UM54 1294 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 SNX9Q9Y5X1 595 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 UNC80Q8N2C7 3258 aa9.4□□□□□ -0.9
HLA-B-258ENST00000640615 LTBP2Q14767 1821 aa9.4□□□□□ -0.91
HLA-B-258ENST00000640615 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 SPTLC1O15269 473 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 NRDCO43847 1150 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 B4GALT3O60512 393 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 B3GAT3O94766 335 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 ALDH2P05091 517 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 SKILP12757 684 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 FERP16591 822 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 CD58P19256 250 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 IGFBP6P24592 240 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-258ENST00000640615 ASPAP45381 313 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 RAP1GAPP47736 663 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 OR1G1P47890 313 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 CDH8P55286 799 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 LILRA4P59901 499 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 YWHAEP62258 255 aaKnown RBP9.39□□□□□ -0.91
HLA-B-258ENST00000640615 DSC1Q08554 894 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 FAM109BQ6ICB4 259 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-258ENST00000640615 DSTYKQ6XUX3 929 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 COLGALT2Q8IYK4 626 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 LRRC43Q8N309 656 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 HERVK_113Q902F9 699 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 SHC3Q92529 594 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 SYN2Q92777 582 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-258ENST00000640615 JAKMIP2Q96AA8 810 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 FAXDC2Q96IV6 333 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 BAG1Q99933 345 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-258ENST00000640615 GPR88Q9GZN0 384 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 SDCBP2Q9H190 292 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 NRDE2Q9H7Z3 1164 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 CYP3A43Q9HB55 503 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 MTMR10Q9NXD2 777 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 AIPL1Q9NZN9 384 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 CXXC1Q9P0U4 656 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-258ENST00000640615 DNAJB4Q9UDY4 337 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 STXBP5LQ9Y2K9 1186 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms