RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KIAA0319Q5VV43 1072 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 PRSS55Q6UWB4 352 aaPredicted RBP14.22□□□□□ -0.13
GTF3A-209ENST00000640289 DSTYKQ6XUX3 929 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.22□□□□□ -0.13
GTF3A-209ENST00000640289 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 MICALL1Q8N3F8 863 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 AOPEPQ8N6M6 819 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 LRRC52Q8N7C0 313 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 SENP8Q96LD8 212 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 ZNF560Q96MR9 790 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 TTPALQ9BTX7 342 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 THAP9Q9H5L6 903 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 TMEM8AQ9HCN3 771 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 TIMM13Q9Y5L4 95 aaPredicted RBP14.22□□□□□ -0.13
GTF3A-209ENST00000640289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.21□□□□□ -0.13
GTF3A-209ENST00000640289 C2orf71A6NGG8 1288 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 KPNA7A9QM74 516 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 HLA-DRAP01903 254 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 URODP06132 367 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 POU3F3P20264 500 aaPredicted RBP14.21□□□□□ -0.13
GTF3A-209ENST00000640289 FGFR3P22607 806 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 PNPLA4P41247 253 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 MXI1P50539 228 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 MYL5Q02045 173 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 NCOA4Q13772 614 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 SMC1AQ14683 1233 aaKnown RBP14.21□□□□□ -0.13
GTF3A-209ENST00000640289 NCAPHQ15003 741 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 SV2CQ496J9 727 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 KRT39Q6A163 491 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 TAS1R2Q8TE23 839 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 RIN2Q8WYP3 895 aaPredicted RBP14.21□□□□□ -0.13
GTF3A-209ENST00000640289 HPDLQ96IR7 371 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 NGRNQ9NPE2 291 aaKnown RBP14.21□□□□□ -0.13
GTF3A-209ENST00000640289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.13
GTF3A-209ENST00000640289 FANCLQ9NW38 375 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 LMCD1Q9NZU5 365 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 STK39Q9UEW8 545 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 PCDHB8Q9UN66 801 aa14.21□□□□□ -0.13
GTF3A-209ENST00000640289 R3HCC1Q9Y3T6 440 aaKnown RBP14.21□□□□□ -0.13
GTF3A-209ENST00000640289 CYB561D2O14569 222 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 PER2O15055 1255 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 STX10O60499 249 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 LILRB3O75022 631 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 RPL17P18621 184 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 GTF2H1P32780 548 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 PIK3CAP42336 1068 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 MTIF2P46199 727 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 ZNF165P49910 485 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 MYO1EQ12965 1108 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 CCDC85BQ15834 202 aaPredicted RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 TCEAL5Q5H9L2 206 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 RBM23Q86U06 439 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 GLYCTKQ8IVS8 523 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 DHX40Q8IX18 779 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 MRPL43Q8N983 215 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 LNX1Q8TBB1 728 aaPredicted RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 SEMA4DQ92854 862 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 PI4K2AQ9BTU6 479 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 NAT10Q9H0A0 1025 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 XYLT2Q9H1B5 865 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 NSUN3Q9H649 340 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 MRPL17Q9NRX2 175 aaKnown RBP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.2□□□□□ -0.14
GTF3A-209ENST00000640289 SNX9Q9Y5X1 595 aa14.2□□□□□ -0.14
GTF3A-209ENST00000640289 SZT2Q5T011 3432 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 CDH23Q9H251 3354 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 KCNJ18B7U540 433 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 SYN3O14994 580 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 CLSTN1O94985 981 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 ODC1P11926 461 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 NRIP1P48552 1158 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 FMO5P49326 533 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 KCNJ12Q14500 433 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 BMS1Q14692 1282 aaKnown RBP14.19□□□□□ -0.14
GTF3A-209ENST00000640289 PSMD5Q16401 504 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 ZNF699Q32M78 642 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 WDR72Q3MJ13 1102 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 VARS2Q5ST30 1063 aaKnown RBP14.19□□□□□ -0.14
GTF3A-209ENST00000640289 CDKAL1Q5VV42 579 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 WSCD1Q658N2 575 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 SPOPLQ6IQ16 392 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 PDE12Q6L8Q7 609 aaKnown RBP14.19□□□□□ -0.14
GTF3A-209ENST00000640289 FAM114A1Q8IWE2 563 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 PPM1EQ8WY54 764 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 PIK3R5Q8WYR1 880 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 KLHL5Q96PQ7 755 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 BPIFA3Q9BQP9 254 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 HSD3B7Q9H2F3 369 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 CHD7Q9P2D1 2997 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 L1RE1Q9UN81 338 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 POLIQ9UNA4 740 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 IRAK3Q9Y616 596 aa14.19□□□□□ -0.14
GTF3A-209ENST00000640289 TEX28O15482 410 aa14.18□□□□□ -0.14
GTF3A-209ENST00000640289 ADAM12O43184 909 aa14.18□□□□□ -0.14
GTF3A-209ENST00000640289 STAU1O95793 577 aaKnown RBP14.18□□□□□ -0.14
GTF3A-209ENST00000640289 AFPP02771 609 aaKnown RBP14.18□□□□□ -0.14
GTF3A-209ENST00000640289 CNPP09543 421 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms