RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TSG101Q99816 390 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TARS2Q9BW92 718 aaKnown RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 NFKBIZQ9BYH8 718 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 GBP3Q9H0R5 595 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TMEM206Q9H813 350 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 SAMSN1Q9NSI8 373 aaKnown RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF180Q9UJW8 692 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 DAAM1Q9Y4D1 1078 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 PHLPP2Q6ZVD8 1323 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 K7ERI5 159 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TLR3O15455 904 aaKnown RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 RFPL1O75677 317 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TFE3P19532 575 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 HTR3AP46098 478 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 GPC3P51654 580 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 PTENP60484 403 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TPM4P67936 248 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 ITKQ08881 620 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TRIP4Q15650 581 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 PPP2R5EQ16537 467 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TPD52L1Q16890 204 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 EDRF1Q3B7T1 1238 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 HSP90AA4PQ58FG1 418 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 CDKAL1Q5VV42 579 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 MRM1Q6IN84 353 aaKnown RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 TAF2Q6P1X5 1199 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 AGMOQ6ZNB7 445 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 LRRC55Q6ZSA7 311 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 SERINC5Q86VE9 423 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 ZBTB8OSQ8IWT0 167 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 SYCP3Q8IZU3 236 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 DNAJB3Q8WWF6 145 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 EEF2KMTQ96G04 330 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF668Q96K58 619 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-220ENST00000640076 SPATA9Q9BWV2 254 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 C2orf40Q9H1Z8 148 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 IFT122Q9HBG6 1241 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 STARD7Q9NQZ5 370 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 AGPAT3Q9NRZ7 376 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 EXOC7Q9UPT5 735 aa8.66□□□□□ -1.02
SCARB2-220ENST00000640076 A0A087WZ62 844 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 TGFBR3LH3BV60 316 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 CALUO43852 315 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 SGPL1O95470 568 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 ATP1A3P13637 1013 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 PHKA2P46019 1235 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 TERF1P54274 439 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 NLRP11P59045 1033 aaKnown RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 CDC42EP1Q00587 391 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 FKBP3Q00688 224 aaKnown RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 STRN3Q13033 797 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 IL31Q6EBC2 164 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF410Q86VK4 478 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 IRF2BP1Q8IU81 584 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 ZC3H3Q8IXZ2 948 aaKnown RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 DRC7Q8IY82 874 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 GOLGA5Q8TBA6 731 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 NOC3LQ8WTT2 800 aaKnown RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 U2AF1L4Q8WU68 220 aaKnown RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 PPP1R16BQ96T49 567 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 FDXACB1Q9BRP7 624 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-220ENST00000640076 ADAMTS10Q9H324 1103 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 THAP9Q9H5L6 903 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 MINDY3Q9H8M7 445 aa8.65□□□□□ -1.02
SCARB2-220ENST00000640076 MKI67P46013 3256 aaKnown RBP8.65□□□□□ -1.03
SCARB2-220ENST00000640076 TISP43B9A030 160 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 INO80B-WBP1J3KQ70 363 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 HNRNPDLO14979 420 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 AP5Z1O43299 807 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 TIMM44O43615 452 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 GPR32O75388 356 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 TCEA3O75764 348 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 PIGRP01833 764 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 NR3C1P04150 777 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 NR2F2P24468 414 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 SNRPFP62306 86 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 MBTD1Q05BQ5 628 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 TMEM62Q0P6H9 643 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 SIM2Q14190 667 aaPredicted RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 PTGISQ16647 500 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 NFIL3Q16649 462 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 MAPK6Q16659 721 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 KIZQ2M2Z5 673 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 SLC39A4Q6P5W5 647 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 ZBTB46Q86UZ6 589 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 EGFL6Q8IUX8 553 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 C12orf56Q8IXR9 622 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 WNT8BQ93098 351 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 SCLT1Q96NL6 688 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 YIPF4Q9BSR8 244 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 FZD8Q9H461 694 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 TRMT13Q9NUP7 481 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 OBP2AQ9NY56 170 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 CGNQ9P2M7 1197 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 ANKRD63C9JTQ0 380 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms