RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 USP15Q9Y4E8 981 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 APOL1O14791 398 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 POU5F1BQ06416 359 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 IER5Q5VY09 327 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 KCNV1Q6PIU1 500 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 PRPF31Q8WWY3 499 aaKnown RBP15.18■□□□□ 0.02
SCARB2-216ENST00000639300 HOXA10P31260 410 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-216ENST00000639300 BACE1P56817 501 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 XRRA1Q6P2D8 792 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 KDELC2Q7Z4H8 507 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 ACTRT1Q8TDG2 376 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 LRGUKQ96M69 825 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 FAM167BQ9BTA0 163 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 CYP4F11Q9HBI6 524 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 ZC3H7BQ9UGR2 993 aaKnown RBP15.18■□□□□ 0.02
SCARB2-216ENST00000639300 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 FAM47DPA6NHR8 397 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 CAND2O75155 1236 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 SMIM24O75264 130 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 CLCN3P51790 818 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 OCRLQ01968 901 aa15.18■□□□□ 0.02
SCARB2-216ENST00000639300 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-216ENST00000639300 TRPA1O75762 1119 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 GZMAP12544 262 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 RFC5P40937 340 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 SNRPFP62306 86 aaKnown RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 IRF2BP1Q8IU81 584 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 CDKL3Q8IVW4 592 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 KIF2BQ8N4N8 673 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 TTC39CQ8N584 583 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 DNAJC19Q96DA6 116 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 TTC1Q99614 292 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 MMTAG2Q9BU76 263 aaKnown RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 SENP1Q9P0U3 644 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 XPO7Q9UIA9 1087 aaKnown RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 PGK2P07205 417 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 RAB44Q7Z6P3 723 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 FAM161BQ96MY7 647 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 FSD1LQ9BXM9 530 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 Q9H521 79 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 NPHS2Q9NP85 383 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 ZFATQ9P243 1243 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 MID2Q9UJV3 735 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 MAP3K7O43318 606 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 ATP5HO75947 161 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 GNAT1P11488 350 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 MIIPQ5JXC2 388 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 FAXCQ5TGI0 409 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 LRRC55Q6ZSA7 311 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 TRIM67Q6ZTA4 783 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 FAM71DQ8N9W8 422 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 PGBD4Q96DM1 585 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 SEMA4AQ9H3S1 761 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 ACP6Q9NPH0 428 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 GTPBP10A4D1E9 387 aaKnown RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 ITGB3P05106 788 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 NLRP11P59045 1033 aaKnown RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 CACNB2Q08289 660 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 CBWD6Q4V339 395 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 CBWD3Q5JTY5 395 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 CBWD5Q5RIA9 395 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 OR6J1Q8NGC5 347 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 SPATA20Q8TB22 786 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 KAT5Q92993 513 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 CCDC124Q96CT7 223 aaKnown RBP15.17■□□□□ 0.02
SCARB2-216ENST00000639300 IDI2Q9BXS1 227 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 FAM198AQ9UFP1 575 aa15.17■□□□□ 0.02
SCARB2-216ENST00000639300 SLC12A3P55017 1021 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 COPS2P61201 443 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 DNAJC3Q13217 504 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 MUM1L1Q5H9M0 696 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 RNF135Q8IUD6 432 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 RDM1Q8NG50 284 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 NT5C1AQ9BXI3 368 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 AGO4Q9HCK5 861 aaKnown RBP15.16■□□□□ 0.02
SCARB2-216ENST00000639300 GAKO14976 1311 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 MEIS2O14770 477 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 PLCB4Q15147 1175 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 C4orf19Q8IY42 314 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 OR6P1Q8NGX9 317 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 GRAMD1AQ96CP6 724 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 ERP27Q96DN0 273 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 HPDLQ96IR7 371 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 METTL5Q9NRN9 209 aaKnown RBP15.16■□□□□ 0.02
SCARB2-216ENST00000639300 ABT1Q9ULW3 272 aaKnown RBP15.16■□□□□ 0.02
SCARB2-216ENST00000639300 ANGPTL3Q9Y5C1 460 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 PDHA1P08559 390 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 CTSHP09668 335 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 MX2P20592 715 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 C1orf146Q5VVC0 180 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 TRPM8Q7Z2W7 1104 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 LRRC34Q8IZ02 419 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 TNIP3Q96KP6 325 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 LRRC4BQ9NT99 713 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 EPS15L1Q9UBC2 864 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms