RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 OSBPL6Q9BZF3 934 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 SEMA4AQ9H3S1 761 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 MAFFQ9ULX9 164 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.34■□□□□ 0.53
SMN2-216ENST00000638794 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.34■□□□□ 0.53
SMN2-216ENST00000638794 TSC2P49815 1807 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 DNAH14Q0VDD8 3507 aa18.34■□□□□ 0.53
SMN2-216ENST00000638794 COL4A2P08572 1712 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 FAM170BA6NMN3 283 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 OGTO15294 1046 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 TRAK2O60296 914 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 MICAL2O94851 1124 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 VNN2O95498 520 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 BMP15O95972 392 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.52
SMN2-216ENST00000638794 OR4Q2P0C623 313 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 SCP2P22307 547 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 LONP1P36776 959 aaKnown RBP18.33■□□□□ 0.52
SMN2-216ENST00000638794 KYAT1Q16773 422 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 CYP4A22Q5TCH4 519 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 SLC39A4Q6P5W5 647 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 ZC3H14Q6PJT7 736 aaKnown RBP18.33■□□□□ 0.52
SMN2-216ENST00000638794 BRAPQ7Z569 592 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 BEST2Q8NFU1 509 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 RAD54LQ92698 747 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 ZNF512Q96ME7 567 aaPredicted RBP18.33■□□□□ 0.52
SMN2-216ENST00000638794 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 ASB16Q96NS5 453 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 FIZ1Q96SL8 496 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 MSTO1Q9BUK6 570 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 ZHX3Q9H4I2 956 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 RPF1Q9H9Y2 349 aaKnown RBP18.33■□□□□ 0.52
SMN2-216ENST00000638794 HEBP1Q9NRV9 189 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 OTOGLQ3ZCN5 2332 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 TICRRQ7Z2Z1 1910 aa18.33■□□□□ 0.52
SMN2-216ENST00000638794 A0A0B4J269 797 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 PPEF2O14830 753 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 XPOTO43592 962 aaKnown RBP18.32■□□□□ 0.52
SMN2-216ENST00000638794 MOSPD3O75425 235 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 ADRB2P07550 413 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 TARSP26639 723 aaKnown RBP18.32■□□□□ 0.52
SMN2-216ENST00000638794 EPHA5P54756 1037 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 GRM2Q14416 872 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 SF3A1Q15459 793 aaKnown RBP18.32■□□□□ 0.52
SMN2-216ENST00000638794 DSTYKQ6XUX3 929 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 USP37Q86T82 979 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 PGLYRP2Q96PD5 576 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 CRISPLD1Q9H336 500 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 ASAH2Q9NR71 780 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 SPATA6Q9NWH7 488 aaPredicted RBP18.32■□□□□ 0.52
SMN2-216ENST00000638794 YIPF1Q9Y548 306 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 F5P12259 2224 aa18.32■□□□□ 0.52
SMN2-216ENST00000638794 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
SMN2-216ENST00000638794 MYL4P12829 197 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 GJA1P17302 382 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 NMT1P30419 496 aaKnown RBP18.31■□□□□ 0.52
SMN2-216ENST00000638794 GTF2BQ00403 316 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 SPATA1Q5VX52 437 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 JADE1Q6IE81 842 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 MAP4K3Q8IVH8 894 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 LEMD2Q8NC56 503 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 LARP4BQ92615 738 aaKnown RBP18.31■□□□□ 0.52
SMN2-216ENST00000638794 DNASE1L2Q92874 299 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 SMARCD2Q92925 531 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 FAM212AQ96EL1 285 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 OXCT2Q9BYC2 517 aaPredicted RBP18.31■□□□□ 0.52
SMN2-216ENST00000638794 CPSF3Q9UKF6 684 aaKnown RBP18.31■□□□□ 0.52
SMN2-216ENST00000638794 SCN1AP35498 2009 aa18.31■□□□□ 0.52
SMN2-216ENST00000638794 SHISA7A6NL88 538 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 NFICP08651 508 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 MAGEA9P43362 315 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 LILRA4P59901 499 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 GPR17Q13304 367 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 TEAD2Q15562 447 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 OVOS1Q6IE37 1185 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 VITQ6UXI7 678 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 ZNF852Q6ZMS4 543 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 CLDN23Q96B33 292 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 TRMT61BQ9BVS5 477 aaKnown RBP18.3■□□□□ 0.52
SMN2-216ENST00000638794 BRD9Q9H8M2 597 aa18.3■□□□□ 0.52
SMN2-216ENST00000638794 TCHHQ07283 1943 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 VPS37CA5D8V6 355 aaPredicted RBP18.29■□□□□ 0.52
SMN2-216ENST00000638794 OR6C75A6NL08 312 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 TISP43B9A030 160 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 ANKRD63C9JTQ0 380 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 LAMTOR5O43504 91 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 TYMPP19971 482 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 VIPR2P41587 438 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 DUSP4Q13115 394 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 ZC2HC1CQ53FD0 456 aaPredicted RBP18.29■□□□□ 0.52
SMN2-216ENST00000638794 C9orf57Q5W0N0 161 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 CD302Q8IX05 232 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 SHKBP1Q8TBC3 707 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 ZSCAN18Q8TBC5 510 aaPredicted RBP18.29■□□□□ 0.52
SMN2-216ENST00000638794 SENP8Q96LD8 212 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 NELL2Q99435 816 aa18.29■□□□□ 0.52
SMN2-216ENST00000638794 LRRC3Q9BY71 257 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms