RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 SYN3O14994 580 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 KIAA0391O15091 583 aaKnown RBP13.52□□□□□ -0.25
CLN6-225ENST00000638144 HOXB8P17481 243 aaPredicted RBP13.52□□□□□ -0.25
CLN6-225ENST00000638144 AARSP49588 968 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLN6-225ENST00000638144 ROR1Q01973 937 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 BFSP1Q12934 665 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 CBX2Q14781 532 aaPredicted RBP13.52□□□□□ -0.25
CLN6-225ENST00000638144 LILRA6Q6PI73 481 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 C12orf56Q8IXR9 622 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.258e-8■□□□□ 8.3
CLN6-225ENST00000638144 SMARCE1Q969G3 411 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.25
CLN6-225ENST00000638144 TSPAN18Q96SJ8 248 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 GZF1Q9H116 711 aaPredicted RBP13.52□□□□□ -0.25
CLN6-225ENST00000638144 ADAM7Q9H2U9 754 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 POMKQ9H5K3 350 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 INTS13Q9NVM9 706 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 SIX4Q9UIU6 781 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
CLN6-225ENST00000638144 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 WDR27A2RRH5 827 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 BIN1O00499 593 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 TNNI1P19237 187 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 TAF6P49848 677 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 POU5F1Q01860 360 aaKnown RBP13.51□□□□□ -0.25
CLN6-225ENST00000638144 YWHAHQ04917 246 aaPredicted RBP13.51□□□□□ -0.25
CLN6-225ENST00000638144 RAB33AQ14088 237 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 PSMD6Q15008 389 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 CEP135Q66GS9 1140 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 ZNF280DQ6N043 979 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 CES5AQ6NT32 575 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 PDXDC1Q6P996 788 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 USP37Q86T82 979 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 ADHFE1Q8IWW8 467 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 GPR65Q8IYL9 337 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 CSGALNACT2Q8N6G5 542 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 APPL2Q8NEU8 664 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 CXorf38Q8TB03 319 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 GOLGA5Q8TBA6 731 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 SLC7A14Q8TBB6 771 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 CACTINQ8WUQ7 758 aaKnown RBP13.51□□□□□ -0.25
CLN6-225ENST00000638144 ELMO3Q96BJ8 720 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 ZNF707Q96C28 371 aaPredicted RBP13.51□□□□□ -0.25
CLN6-225ENST00000638144 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 TIGD1Q96MW7 591 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 TMEM209Q96SK2 561 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 CGRRF1Q99675 332 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 BACE2Q9Y5Z0 518 aa13.51□□□□□ -0.25
CLN6-225ENST00000638144 PDXKO00764 312 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 CYB561D2O14569 222 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 CCL16O15467 120 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 TBC1D4O60343 1298 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 SMC2O95347 1197 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 TNNC2P02585 160 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 C8AP07357 584 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 ODC1P11926 461 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 CPB1P15086 417 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 PRCPP42785 496 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 UBE2HP62256 183 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
CLN6-225ENST00000638144 DLG4P78352 724 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 ITIH3Q06033 890 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
CLN6-225ENST00000638144 CAMK4Q16566 473 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 LIN9Q5TKA1 542 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 WSCD1Q658N2 575 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 OVOS1Q6IE37 1185 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 GJD3Q8N144 294 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 GUF1Q8N442 669 aaKnown RBP13.5□□□□□ -0.25
CLN6-225ENST00000638144 SMG7Q92540 1137 aaKnown RBP13.5□□□□□ -0.25
CLN6-225ENST00000638144 ANKRD36BP1Q96IX9 119 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 ZNF560Q96MR9 790 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 PGLYRP2Q96PD5 576 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 FNBP1Q96RU3 617 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 KIAA1586Q9HCI6 787 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 DMAC2Q9NW81 257 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
CLN6-225ENST00000638144 MAN1B1Q9UKM7 699 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 ITGA11Q9UKX5 1188 aa13.5□□□□□ -0.25
CLN6-225ENST00000638144 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.5□□□□□ -0.25
CLN6-225ENST00000638144 TRIM49BA6NDI0 452 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 LRRIQ3A6PVS8 624 aaPredicted RBP13.49□□□□□ -0.25
CLN6-225ENST00000638144 KPNA7A9QM74 516 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 H7C4K7 107 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 HCRTO43612 131 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 CALUO43852 315 aaPredicted RBP13.49□□□□□ -0.25
CLN6-225ENST00000638144 ZMYND10O75800 440 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 SEC24AO95486 1093 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 NR2F2P24468 414 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 NTHL1P78549 312 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 DUOXA2Q1HG44 320 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 SV2CQ496J9 727 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 ZCWPW2Q504Y3 356 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 PPM1LQ5SGD2 360 aa13.49□□□□□ -0.25
CLN6-225ENST00000638144 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
CLN6-225ENST00000638144 SLC8B1Q6J4K2 584 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms