RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 CXCL10P02778 98 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 CLTBP09497 229 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
CLN6-223ENST00000637823 TNFAIP3P21580 790 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 LRPAP1P30533 357 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 PNPLA4P41247 253 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 BMS1Q14692 1282 aaKnown RBP12.61□□□□□ -0.39
CLN6-223ENST00000637823 SLC18A3Q16572 532 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 ZNF662Q6ZS27 426 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 TXLNBQ8N3L3 684 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 TTC39CQ8N584 583 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 ACRBPQ8NEB7 543 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 GSTCDQ8NEC7 633 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 DBF4BQ8NFT6 615 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 PPP1R13BQ96KQ4 1090 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 ZFP42Q96MM3 310 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 GAD1Q99259 594 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 ARID3AQ99856 593 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 SYT11Q9BT88 431 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 RSAD1Q9HA92 442 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 LUC7LQ9NQ29 371 aaKnown RBP12.61□□□□□ -0.39
CLN6-223ENST00000637823 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
CLN6-223ENST00000637823 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
CLN6-223ENST00000637823 TUBGCP4Q9UGJ1 667 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 TBX21Q9UL17 535 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 PCDHB4Q9Y5E5 795 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 MYH10P35580 1976 aa12.61□□□□□ -0.39
CLN6-223ENST00000637823 A0A087X0T9 212 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 ZNF263O14978 683 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 INPPL1O15357 1258 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 FAM228BP0C875 321 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 RPL9P32969 192 aaKnown RBP12.6□□□□□ -0.39
CLN6-223ENST00000637823 CYP2C18P33260 490 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 RFC2P35250 354 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 MLH1P40692 756 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 ASPAP45381 313 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 CCL23P55773 120 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 TNNC1P63316 161 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 ZNF677Q86XU0 584 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 TMEM130Q8N3G9 435 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 RNF169Q8NCN4 708 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 SLC30A5Q8TAD4 765 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 ZNF560Q96MR9 790 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 WNT8AQ9H1J5 351 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
CLN6-223ENST00000637823 CISHQ9NSE2 258 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 RNF19AQ9NV58 838 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 NOCTQ9UK39 431 aaKnown RBP12.6□□□□□ -0.39
CLN6-223ENST00000637823 POLIQ9UNA4 740 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 REXO2Q9Y3B8 237 aaKnown RBP12.6□□□□□ -0.39
CLN6-223ENST00000637823 PCDHA13Q9Y5I0 950 aa12.6□□□□□ -0.39
CLN6-223ENST00000637823 DDX3XO00571 662 aaKnown RBP eCLIP12.59□□□□□ -0.399e-13■■□□□ 11.4
CLN6-223ENST00000637823 TUBB4AP04350 444 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 WEE2P0C1S8 567 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 CYP11B1P15538 503 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 MAGEA1P43355 309 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 PDE6CP51160 858 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 VAV2P52735 878 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 ZNF132P52740 706 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 CDR2Q01850 454 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 CYP27A1Q02318 531 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
CLN6-223ENST00000637823 SOX4Q06945 474 aaPredicted RBP12.59□□□□□ -0.39
CLN6-223ENST00000637823 NAB2Q15742 525 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 TMEM270Q6UE05 265 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 GLB1LQ6UWU2 654 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 KIAA1328Q86T90 577 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 SLC47A2Q86VL8 602 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 RBBP8NLQ8NC74 664 aaPredicted RBP12.59□□□□□ -0.39
CLN6-223ENST00000637823 EPS8L1Q8TE68 723 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 SCLYQ96I15 445 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 TMEM161AQ9NX61 479 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 GDAP2Q9NXN4 497 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 NAGPAQ9UK23 515 aa12.59□□□□□ -0.39
CLN6-223ENST00000637823 KPNA7A9QM74 516 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 KIF2AO00139 706 aaPredicted RBP12.58□□□□□ -0.4
CLN6-223ENST00000637823 PPEF2O14830 753 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 KIAA0355O15063 1070 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 PJA2O43164 708 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 TIMP1P01033 207 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 FAM163BP0C2L3 166 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 CHRNB2P17787 502 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 CD58P19256 250 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 PAX3P23760 479 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 TAF6P49848 677 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 SCNN1GP51170 649 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 GRIK3Q13003 919 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 PTPN14Q15678 1187 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 SV2CQ496J9 727 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 CCDC122Q5T0U0 273 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 ALKBH5Q6P6C2 394 aaKnown RBP12.58□□□□□ -0.4
CLN6-223ENST00000637823 SCARA5Q6ZMJ2 495 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 NOP9Q86U38 636 aaKnown RBP12.58□□□□□ -0.4
CLN6-223ENST00000637823 GLYCTKQ8IVS8 523 aa12.58□□□□□ -0.4
CLN6-223ENST00000637823 RPUSD2Q8IZ73 545 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms