RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 USP8P40818 1118 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 PNPLA4P41247 253 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 MAGEA1P43355 309 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 ZNF132P52740 706 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 ETF1P62495 437 aaKnown RBP16.44■□□□□ 0.22
CLN6-219ENST00000637329 DNTTIP2Q5QJE6 756 aaKnown RBP16.44■□□□□ 0.22
CLN6-219ENST00000637329 GPIHBP1Q8IV16 184 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 SLC30A5Q8TAD4 765 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 PGBD4Q96DM1 585 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 ZMAT2Q96NC0 199 aaKnown RBP16.44■□□□□ 0.22
CLN6-219ENST00000637329 TOX2Q96NM4 488 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 AGPAT1Q99943 283 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 APOL6Q9BWW8 343 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 CYP3A43Q9HB55 503 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.221e-8■■■■■ 107.1
CLN6-219ENST00000637329 SMIM28A0A1B0GU29 152 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 ANO9A1A5B4 782 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 BTNL10A8MVZ5 291 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 DDX3XO00571 662 aaKnown RBP eCLIP16.43■□□□□ 0.229e-13■■□□□ 11.4
CLN6-219ENST00000637329 CYP26A1O43174 497 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 CYP11B1P15538 503 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 GJA8P48165 433 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 CDR2Q01850 454 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 CYP27A1Q02318 531 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 MBTPS1Q14703 1052 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 CCDC122Q5T0U0 273 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 ALKBH5Q6P6C2 394 aaKnown RBP16.43■□□□□ 0.22
CLN6-219ENST00000637329 RBBP8NLQ8NC74 664 aaPredicted RBP16.43■□□□□ 0.22
CLN6-219ENST00000637329 LNX1Q8TBB1 728 aaPredicted RBP16.43■□□□□ 0.22
CLN6-219ENST00000637329 HPDLQ96IR7 371 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 RPS6KC1Q96S38 1066 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 LZTFL1Q9NQ48 299 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 TUBGCP4Q9UGJ1 667 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 AGAP1Q9UPQ3 857 aa16.43■□□□□ 0.22
CLN6-219ENST00000637329 RANBP2P49792 3224 aaKnown RBP16.42■□□□□ 0.22
CLN6-219ENST00000637329 INPPL1O15357 1258 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 MGEA5O60502 916 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 TFRCP02786 760 aaKnown RBP16.42■□□□□ 0.22
CLN6-219ENST00000637329 TNFAIP3P21580 790 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 LRPAP1P30533 357 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 TNNC1P63316 161 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 WDR72Q3MJ13 1102 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 PPP1R2P3Q6NXS1 205 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 SLC39A5Q6ZMH5 540 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 TRIM72Q6ZMU5 477 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 NOP9Q86U38 636 aaKnown RBP16.42■□□□□ 0.22
CLN6-219ENST00000637329 SLC47A2Q86VL8 602 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 GLYCTKQ8IVS8 523 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 APBB2Q92870 758 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 PPP1R10Q96QC0 940 aaKnown RBP16.42■□□□□ 0.22
CLN6-219ENST00000637329 ADAM2Q99965 735 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 RGS18Q9NS28 235 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 CISHQ9NSE2 258 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 PCDHB4Q9Y5E5 795 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
CLN6-219ENST00000637329 DCDC2CA8MYV0 355 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 PTGESO14684 152 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 GZMAP12544 262 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 INCA1Q0VD86 236 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 GLRA4Q5JXX5 417 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 C9orf57Q5W0N0 161 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 GPR153Q6NV75 609 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 TMEM270Q6UE05 265 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 RPUSD2Q8IZ73 545 aaKnown RBP16.41■□□□□ 0.22
CLN6-219ENST00000637329 KIF18AQ8NI77 898 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 SLC20A1Q8WUM9 679 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 DDX1Q92499 740 aaKnown RBP16.41■□□□□ 0.22
CLN6-219ENST00000637329 RSAD1Q9HA92 442 aa16.41■□□□□ 0.22
CLN6-219ENST00000637329 A0A0A6YYK5 440 aaPredicted RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 RCCD1A6NED2 376 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 PQBP1O60828 265 aaKnown RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 EOMESO95936 686 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 PAEPP09466 180 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 PAX3P23760 479 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 GNA15P30679 374 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 MLH1P40692 756 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 GUCY2FP51841 1108 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 FMO1Q01740 532 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 SV2CQ496J9 727 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 SCARA5Q6ZMJ2 495 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 AGMOQ6ZNB7 445 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 ECHDC2Q86YB7 292 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 RNF10Q8N5U6 811 aaKnown RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 RSPH1Q8WYR4 309 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 SECISBP2LQ93073 1101 aaKnown RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 C18orf25Q96B23 403 aaPredicted RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 ELMO3Q96BJ8 720 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 CALR3Q96L12 384 aaKnown RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 OSBPL7Q9BZF2 842 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 LACRTQ9GZZ8 138 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 TSPYL2Q9H2G4 693 aaPredicted RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 PRO3102Q9H379 93 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 KLK14Q9P0G3 267 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 NXF1Q9UBU9 619 aaKnown RBP16.4■□□□□ 0.22
CLN6-219ENST00000637329 PAXBP1Q9Y5B6 917 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 NCANO14594 1321 aa16.4■□□□□ 0.22
CLN6-219ENST00000637329 A0A0U1RQJ8 604 aa16.39■□□□□ 0.21
CLN6-219ENST00000637329 ARL5CA6NH57 179 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms