RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 KCNJ6P48051 423 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 TAF6P49848 677 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 LILRA4P59901 499 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
LINC00643-207ENST00000637212 RNASELQ05823 741 aaKnown RBP14.36□□□□□ -0.11
LINC00643-207ENST00000637212 DSC1Q08554 894 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 RAPGEF1Q13905 1077 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 MEA1Q16626 185 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 SV2CQ496J9 727 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 SPOPLQ6IQ16 392 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 ZNF365Q70YC5 407 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 FAM71AQ8IYT1 594 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 PHOSPHO2Q8TCD6 241 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
LINC00643-207ENST00000637212 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 GPR88Q9GZN0 384 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 TBC1D13Q9NVG8 400 aa14.36□□□□□ -0.11
LINC00643-207ENST00000637212 CARNS1A5YM72 827 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 F8VZ95 297 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 ALDH2P05091 517 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 ASPAP45381 313 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 BPIFB4P59827 614 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 TNNC1P63316 161 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 ARHGAP44Q17R89 818 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 TMEM240Q5SV17 173 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 LIMS2Q7Z4I7 341 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 IRF2BP2Q7Z5L9 587 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 COLGALT2Q8IYK4 626 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 ZNF689Q96CS4 500 aaPredicted RBP14.35□□□□□ -0.11
LINC00643-207ENST00000637212 BAG1Q99933 345 aaPredicted RBP14.35□□□□□ -0.11
LINC00643-207ENST00000637212 TMEM175Q9BSA9 504 aa14.35□□□□□ -0.11
LINC00643-207ENST00000637212 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
LINC00643-207ENST00000637212 AJAP1Q9UKB5 411 aaPredicted RBP14.35□□□□□ -0.11
LINC00643-207ENST00000637212 ARHGEF37A1IGU5 675 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 TBKBP1A7MCY6 615 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 TMEM189-UBE2V1I3L0A0 370 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 TACC1O75410 805 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 DDHD2O94830 711 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 SERPING1P05155 500 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 ACO1P21399 889 aaKnown RBP14.34□□□□□ -0.11
LINC00643-207ENST00000637212 ANXA13P27216 316 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 PRKCIP41743 596 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 CLCNKBP51801 687 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 GOLGA8FQ08AF8 430 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 GOLGA8DPQ0D2H9 430 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 ASIC2Q16515 512 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 OTOP2Q7RTS6 562 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 ZNF280BQ86YH2 543 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 UBR7Q8N806 425 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 KAT5Q92993 513 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 TRIM44Q96DX7 344 aaPredicted RBP14.34□□□□□ -0.11
LINC00643-207ENST00000637212 COLEC11Q9BWP8 271 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 MTIF3Q9H2K0 278 aaKnown RBP14.34□□□□□ -0.11
LINC00643-207ENST00000637212 GOLGA2P5Q9HBQ8 144 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.11
LINC00643-207ENST00000637212 BRCA2P51587 3418 aa14.34□□□□□ -0.11
LINC00643-207ENST00000637212 PPEF2O14830 753 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 SPTLC1O15269 473 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 HUS1O60921 280 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 B3GAT3O94766 335 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 CLSTN1O94985 981 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 UPP2O95045 317 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 SYN1P17600 705 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 AARSP49588 968 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC00643-207ENST00000637212 EPHB4P54760 987 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 CMTR2Q8IYT2 770 aaKnown RBP14.33□□□□□ -0.12
LINC00643-207ENST00000637212 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 LRRC43Q8N309 656 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 SPATA18Q8TC71 538 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 MMS19Q96T76 1030 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC00643-207ENST00000637212 DNAI2Q9GZS0 605 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 NRDE2Q9H7Z3 1164 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 CISHQ9NSE2 258 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 KIAA1257Q9ULG3 409 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 ZMYND8Q9ULU4 1186 aaPredicted RBP14.33□□□□□ -0.12
LINC00643-207ENST00000637212 POLIQ9UNA4 740 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 SNX9Q9Y5X1 595 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 DNAH12Q6ZR08 3092 aa14.33□□□□□ -0.12
LINC00643-207ENST00000637212 SSU72P8A0A1W2PR75 194 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 CYB561D2O14569 222 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 GFPT2O94808 682 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 WEE2P0C1S8 567 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 SKILP12757 684 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 DEFB103AP81534 67 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 PTK2Q05397 1052 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 KLHL30Q0D2K2 578 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 CD300LGQ6UXG3 332 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 UNC93AQ86WB7 457 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 TMEM139Q8IV31 216 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 TMEM86AQ8N2M4 240 aa14.32□□□□□ -0.12
LINC00643-207ENST00000637212 TMEM130Q8N3G9 435 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms