RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 UROC1Q96N76 676 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 COLEC11Q9BWP8 271 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.27
CTSD-207ENST00000636571 A0A1B0GTH6 734 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 LRRC10BA6NIK2 292 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 HLA-DRAP01903 254 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 MXI1P50539 228 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 LILRA4P59901 499 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 NCOA4Q13772 614 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 VWA3BQ502W6 1294 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 FUT10Q6P4F1 479 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 Q7L0L9 218 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 SPC24Q8NBT2 197 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 DDX27Q96GQ7 796 aaKnown RBP16.7■□□□□ 0.26
CTSD-207ENST00000636571 TMEM169Q96HH4 297 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
CTSD-207ENST00000636571 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
CTSD-207ENST00000636571 CBFA2T2O43439 604 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 EFEMP2O95967 443 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 AFPP02771 609 aaKnown RBP16.69■□□□□ 0.26
CTSD-207ENST00000636571 TPM2P07951 284 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 PIK3CAP42336 1068 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 RBP5P82980 135 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 UBXN1Q04323 297 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 ENPEPQ07075 957 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 GPM6BQ13491 265 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 CAMK1Q14012 370 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 GRIN2CQ14957 1233 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 NR1I3Q14994 352 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 MAN2A1Q16706 1144 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 KRT39Q6A163 491 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 USP37Q86T82 979 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 DRC7Q8IY82 874 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 SPPL3Q8TCT6 385 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 POF1BQ8WVV4 589 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 AUTS2Q8WXX7 1259 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 PRDM12Q9H4Q4 367 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 RWDD3Q9Y3V2 267 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 TIMM13Q9Y5L4 95 aaPredicted RBP16.69■□□□□ 0.26
CTSD-207ENST00000636571 TSC2P49815 1807 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 TMEM189-UBE2V1I3L0A0 370 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 LPXNO60711 386 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 PPM1AP35813 382 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 MYL7Q01449 175 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 TRPC3Q13507 836 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 HPDLQ96IR7 371 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 PLVAPQ9BX97 442 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 NDST4Q9H3R1 872 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 POLIQ9UNA4 740 aa16.69■□□□□ 0.26
CTSD-207ENST00000636571 LGALS16A8MUM7 142 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 H3BNC9 293 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 CLSTN1O94985 981 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
CTSD-207ENST00000636571 GTF2H1P32780 548 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 IRS1P35568 1242 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 AARSP49588 968 aaKnown RBP eCLIP16.68■□□□□ 0.26
CTSD-207ENST00000636571 TAF6P49848 677 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 AP3M2P53677 418 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 ERVFC1P60507 584 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 PLCB3Q01970 1234 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 APBA1Q02410 837 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 FAM171A1Q5VUB5 890 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 RNF168Q8IYW5 571 aaPredicted RBP16.68■□□□□ 0.26
CTSD-207ENST00000636571 SAMD11Q96NU1 681 aa16.68■□□□□ 0.26
CTSD-207ENST00000636571 C11orf84Q9BUA3 381 aaPredicted RBP16.68■□□□□ 0.26
CTSD-207ENST00000636571 APOBEC3GQ9HC16 384 aaKnown RBP16.68■□□□□ 0.26
CTSD-207ENST00000636571 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 C2CD2LO14523 706 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 RB1P06400 928 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 FXR1P51114 621 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTSD-207ENST00000636571 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 DDX53Q86TM3 631 aaKnown RBP16.67■□□□□ 0.26
CTSD-207ENST00000636571 VPS52Q8N1B4 723 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 LRRC52Q8N7C0 313 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 MRFAP1L1Q96HT8 127 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 SNX9Q9Y5X1 595 aa16.67■□□□□ 0.26
CTSD-207ENST00000636571 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.266e-7■■■■■ 152.8
CTSD-207ENST00000636571 STX10O60499 249 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 TPM3P06753 285 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 KLK7P49862 253 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 LRMPQ12912 555 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 ZNF697Q5TEC3 545 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 DSTYKQ6XUX3 929 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 SCARA5Q6ZMJ2 495 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 TMC6Q7Z403 805 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 FBXL13Q8NEE6 735 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 LMO3Q8TAP4 145 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 SUSD3Q96L08 255 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 ZNF560Q96MR9 790 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 RAB20Q9NX57 234 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 NXF1Q9UBU9 619 aaKnown RBP16.66■□□□□ 0.26
CTSD-207ENST00000636571 PRUNE2Q8WUY3 3088 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 HCRTO43612 131 aa16.66■□□□□ 0.26
CTSD-207ENST00000636571 RAP1GAPP47736 663 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms