RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 INSL5Q9Y5Q6 135 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 KMT2EQ8IZD2 1858 aa20.55■□□□□ 0.88
CLN6-213ENST00000636212 OR6C75A6NL08 312 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 ZNF197O14709 1029 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 OAZ2O95190 189 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 RHOP08100 348 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 NFICP08651 508 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 ZSCAN22P10073 491 aaPredicted RBP20.54■□□□□ 0.88
CLN6-213ENST00000636212 AARSP49588 968 aaKnown RBP eCLIP20.54■□□□□ 0.88
CLN6-213ENST00000636212 GUCY2FP51841 1108 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 ARMCX5Q6P1M9 558 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 NT5DC4Q86YG4 428 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 ITFG1Q8TB96 612 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 ZNF512Q96ME7 567 aaPredicted RBP20.54■□□□□ 0.88
CLN6-213ENST00000636212 RTP3Q9BQQ7 232 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 TNMDQ9H2S6 317 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 TMEM206Q9H813 350 aa20.54■□□□□ 0.88
CLN6-213ENST00000636212 TIMM13Q9Y5L4 95 aaPredicted RBP20.54■□□□□ 0.88
CLN6-213ENST00000636212 TISP43B9A030 160 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 GALR2O43603 387 aaPredicted RBP20.53■□□□□ 0.88
CLN6-213ENST00000636212 PPP1R37O75864 691 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 TYMPP19971 482 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 LILRA4P59901 499 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 CYP4A22Q5TCH4 519 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 C9orf57Q5W0N0 161 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 ATL3Q6DD88 541 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 OVOS1Q6IE37 1185 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 ALYREFQ86V81 257 aaKnown RBP20.53■□□□□ 0.88
CLN6-213ENST00000636212 METTL23Q86XA0 190 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 IQUBQ8NA54 791 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 CORO1BQ9BR76 489 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 AVENQ9NQS1 362 aaPredicted RBP20.53■□□□□ 0.88
CLN6-213ENST00000636212 DPP3Q9NY33 737 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 GDE1Q9NZC3 331 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 DSEQ9UL01 958 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 CA14Q9ULX7 337 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 TRIOO75962 3097 aa20.53■□□□□ 0.88
CLN6-213ENST00000636212 ZNF318Q5VUA4 2279 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 A0A087X0B3 334 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 SEC24AO95486 1093 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 F13A1P00488 732 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 AOC1P19801 751 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 GARTP22102 1010 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 PLD1Q13393 1074 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 FOXD4L6Q3SYB3 417 aaPredicted RBP20.52■□□□□ 0.88
CLN6-213ENST00000636212 PARM1Q6UWI2 310 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 FOXD4L3Q6VB84 417 aaPredicted RBP20.52■□□□□ 0.88
CLN6-213ENST00000636212 RNF19BQ6ZMZ0 732 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 PDZD4Q76G19 769 aaPredicted RBP20.52■□□□□ 0.88
CLN6-213ENST00000636212 NPAS3Q8IXF0 933 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 TMEM105Q8N8V8 129 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 NOC3LQ8WTT2 800 aaKnown RBP20.52■□□□□ 0.88
CLN6-213ENST00000636212 ING5Q8WYH8 240 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 DHX58Q96C10 678 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 SENP8Q96LD8 212 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 FAM213AQ9BRX8 229 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 CFAP45Q9UL16 551 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 MYH15Q9Y2K3 1946 aa20.52■□□□□ 0.88
CLN6-213ENST00000636212 FRMD3A2A2Y4 597 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 ME1P48163 572 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 TAF6P49848 677 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 TWF1Q12792 350 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 TCF15Q12870 199 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 MYBPC2Q14324 1141 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 LEMD2Q8NC56 503 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 GPR152Q8TDT2 470 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 CACTINQ8WUQ7 758 aaKnown RBP20.51■□□□□ 0.87
CLN6-213ENST00000636212 ATOH1Q92858 354 aaPredicted RBP20.51■□□□□ 0.87
CLN6-213ENST00000636212 FGF14Q92915 247 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 MCRS1Q96EZ8 462 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 ZNF560Q96MR9 790 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 SLC2A4RGQ9NR83 387 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 FAM13BQ9NYF5 915 aa20.51■□□□□ 0.87
CLN6-213ENST00000636212 ANO9A1A5B4 782 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 PIRO00625 290 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 PPEF2O14830 753 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 KIAA0391O15091 583 aaKnown RBP20.5■□□□□ 0.87
CLN6-213ENST00000636212 ADSSP30520 456 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 PNPLA4P41247 253 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 ALDH1A3P47895 512 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 MRE11P49959 708 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 ASIC1P78348 528 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 PFKPQ01813 784 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 KCNA1Q09470 495 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 GPR17Q13304 367 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 SV2CQ496J9 727 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 THEM5Q8N1Q8 247 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 TMEM130Q8N3G9 435 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 SHDQ96IW2 340 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 PYM1Q9BRP8 204 aaKnown RBP20.5■□□□□ 0.87
CLN6-213ENST00000636212 MAGEF1Q9HAY2 307 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 ASAH2Q9NR71 780 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 ARHGEF3Q9NR81 526 aa20.5■□□□□ 0.87
CLN6-213ENST00000636212 RBAKQ9NYW8 714 aaPredicted RBP20.5■□□□□ 0.87
CLN6-213ENST00000636212 R3HCC1Q9Y3T6 440 aaKnown RBP20.5■□□□□ 0.87
CLN6-213ENST00000636212 MICAL2O94851 1124 aa20.49■□□□□ 0.87
CLN6-213ENST00000636212 CASP5P51878 434 aa20.49■□□□□ 0.87
CLN6-213ENST00000636212 EPHB3P54753 998 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms