RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 BCL10O95999 233 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 APOC1P02654 83 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 GSTM1P09488 218 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 HDAC1Q13547 482 aaPredicted RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 SETD3Q86TU7 594 aaPredicted RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 RNF135Q8IUD6 432 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 PHACTR4Q8IZ21 702 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 DHTKD1Q96HY7 919 aaPredicted RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 AIF1LQ9BQI0 150 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 TBCDQ9BTW9 1192 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 ZFATQ9P243 1243 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 TEX14Q8IWB6 1497 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 ASXL1Q8IXJ9 1541 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 PABPC1P11940 636 aaKnown RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 CMA1P23946 247 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 PRKAA1Q13131 559 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 PWP1Q13610 501 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 TRIM16LQ309B1 348 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 NUP93Q8N1F7 819 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 ZSCAN10Q96SZ4 725 aaPredicted RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 PCDH18Q9HCL0 1135 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 DBR1Q9UK59 544 aaKnown RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 CES2O00748 559 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 SGSM2O43147 1006 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 IDH3BO43837 385 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 FAM200BP0CF97 657 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 CPB1P15086 417 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 FKBP3Q00688 224 aaKnown RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 POLD3Q15054 466 aaPredicted RBP6.28□□□□□ -1.4
SCN1A-212ENST00000636194 SAMD3Q8N6K7 520 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 GRAMD1AQ96CP6 724 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 MPP4Q96JB8 637 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 DSCC1Q9BVC3 393 aa6.28□□□□□ -1.4
SCN1A-212ENST00000636194 KIF20BQ96Q89 1820 aa6.27□□□□□ -1.4
SCN1A-212ENST00000636194 PNMA8CA0A1B0GUJ8 204 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 TRIM38O00635 465 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 CLDN3O15551 220 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 AKAP10O43572 662 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 RAB25P57735 213 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 TTLL4Q14679 1199 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 PLCL1Q15111 1095 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 SIX5Q8N196 739 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 MCPH1Q8NEM0 835 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF560Q96MR9 790 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 EMILIN2Q9BXX0 1053 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 NFKBIZQ9BYH8 718 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 C2orf40Q9H1Z8 148 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 SNX9Q9Y5X1 595 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 MAP3K5Q99683 1374 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 MED23Q9ULK4 1368 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 GRIN2BQ13224 1484 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 OPLAHO14841 1288 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 LSM1O15116 133 aaKnown RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 TRIM3O75382 744 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 AXLP30530 894 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 GRIK1P39086 918 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 MXI1P50539 228 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 IL2P60568 153 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 ERMARDQ5T6L9 678 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 CDKL3Q8IVW4 592 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 DIS3L2Q8IYB7 885 aaKnown RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 RTKN2Q8IZC4 609 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 GINM1Q9NU53 330 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 FBXO40Q9UH90 709 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 AOX1Q06278 1338 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 LRRC9Q6ZRR7 1453 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 STRNO43815 780 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 ACSL3O95573 720 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 MYL12AP19105 171 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 PAICSP22234 425 aaKnown RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 SDC4P31431 198 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 GMFBP60983 142 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 ROR1Q01973 937 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 WASHC2DQ5SRD0 308 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 ANKRD40Q6AI12 368 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 FAM220AQ7Z4H9 259 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 WNK4Q96J92 1243 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 VPS11Q9H270 941 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 DNAJC11Q9NVH1 559 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 HEY1Q9Y5J3 304 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 SEC24DO94855 1032 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 SEMA3DO95025 777 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 FGRP09769 529 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 IL12RB1P42701 662 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 RAD23BP54727 409 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 DLG1Q12959 904 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 UTS2BQ765I0 119 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 C11orf96Q7Z7L8 435 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 C11orf74Q86VG3 221 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 TESK2Q96S53 571 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 NT5C1AQ9BXI3 368 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 ARHGAP28Q9P2N2 729 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 XPO7Q9UIA9 1087 aaKnown RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 NCKAP1Q9Y2A7 1128 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 THRAP3Q9Y2W1 955 aaKnown RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 EPN1Q9Y6I3 576 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 SYCP2Q9BX26 1530 aa6.27□□□□□ -1.41
SCN1A-212ENST00000636194 GTPBP6O43824 516 aaPredicted RBP6.27□□□□□ -1.41
SCN1A-212ENST00000636194 MYBL1P10243 752 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms