RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-219	ENST00000635917	L1RE1	Q9UN81	338 aa		13.38	□□□□□ -0.27
CACNA1A-219	ENST00000635917	C2CD2	Q9Y426	696 aa		13.38	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MAP2K7	O14733	419 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CYP2C9	P11712	490 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	PSMC4	P43686	418 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	PEX5	P50542	639 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	GJA9	P57773	515 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	TRPC3	Q13507	836 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	LONRF2	Q1L5Z9	754 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	PHF13	Q86YI8	300 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	DNAJB3	Q8WWF6	145 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CPA5	Q8WXQ8	436 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	RUBCN	Q92622	972 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ZNF653	Q96CK0	615 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	VCPIP1	Q96JH7	1222 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	OSMR	Q99650	979 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	AP5M1	Q9H0R1	490 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CXCL16	Q9H2A7	254 aa		13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ABT1	Q9ULW3	272 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1A-219	ENST00000635917	STAU1	O95793	577 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MYL3	P08590	195 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	WEE2	P0C1S8	567 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MYBL2	P10244	700 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	EIF4B	P23588	611 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CDH5	P33151	784 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	SNX17	Q15036	470 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ZBTB6	Q15916	424 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	DCAF4L1	Q3SXM0	396 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	NAA35	Q5VZE5	725 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CYP4F22	Q6NT55	531 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ALKAL1	Q6UXT8	129 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	NT5DC4	Q86YG4	428 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	SMC1B	Q8NDV3	1235 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ACAP3	Q96P50	834 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	KATNAL1	Q9BW62	490 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	SDCBP2	Q9H190	292 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	UPF3A	Q9H1J1	476 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CNOT8	Q9UFF9	292 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	POLI	Q9UNA4	740 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ITGB3	P05106	788 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MYBL1	P10243	752 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	RRM1	P23921	792 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ATIC	P31939	592 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	FLT3LG	P49771	235 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	NUBP1	P53384	320 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	FCGRT	P55899	365 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	GLE1	Q53GS7	698 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	SLC27A1	Q6PCB7	646 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CPNE8	Q86YQ8	564 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	WHAMM	Q8TF30	809 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	TFAP2B	Q92481	460 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	KRT35	Q92764	455 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	BTBD6	Q96KE9	485 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	SCLT1	Q96NL6	688 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ADPGK	Q9BRR6	497 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	PCDHGC3	Q9UN70	934 aa		13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	NOC2L	Q9Y3T9	749 aa	Known RBP	13.36	□□□□□ -0.27
CACNA1A-219	ENST00000635917	TCRBV5S1A1T	A0A578	114 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MIF4GD	A9UHW6	222 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	PGRMC1	O00264	195 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	THAP12	O43422	761 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CEP104	O60308	925 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ALDH1A1	P00352	501 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	COMT	P21964	271 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MARCKSL1	P49006	195 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	TMEM132D	Q14C87	1099 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	PLEKHA7	Q6IQ23	1121 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	LLGL2	Q6P1M3	1020 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CD302	Q8IX05	232 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	WDTC1	Q8N5D0	677 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ZMAT2	Q96NC0	199 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	SELENOO	Q9BVL4	669 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	EIF2A	Q9BY44	585 aa	Known RBP	13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	UBXN6	Q9BZV1	441 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	TRIM7	Q9C029	511 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	PLEKHA5	Q9HAU0	1116 aa		13.35	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ZMYND10	O75800	440 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	NPTXR	O95502	500 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CD58	P19256	250 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MMP8	P22894	467 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CTNNA2	P26232	953 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	TNFRSF8	P28908	595 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	AXL	P30530	894 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CTNNA1	P35221	906 aa	Known RBP	13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	NSF	P46459	744 aa	Known RBP	13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	RNASE9	P60153	205 aa	Known RBP	13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	MESD	Q14696	234 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	WDR72	Q3MJ13	1102 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	C2CD6	Q53TS8	623 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	ZNF667	Q5HYK9	610 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	NOTUM	Q6P988	496 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	CATSPER4	Q7RTX7	472 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	TRIM11	Q96F44	468 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	SNX27	Q96L92	541 aa		13.34	□□□□□ -0.27
CACNA1A-219	ENST00000635917	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms