RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ARAP1Q96P48 1450 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 RPTORQ8N122 1335 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 CDHR4A6H8M9 788 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 MYMKA6NI61 221 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 TGM5O43548 720 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 KDM1AO60341 852 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 PDE8AO60658 829 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 HNRNPCP07910 306 aaKnown RBP eCLIP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 EBLN1P0CF75 366 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 CKBP12277 381 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 CERS1P27544 350 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 NR4A2P43354 598 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 MANFP55145 182 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 LGALS4P56470 323 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 LINC00205P59089 165 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 NOMO3P69849 1222 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 CCT2P78371 535 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 STRN3Q13033 797 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 NOMO1Q15155 1222 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 PCBP1Q15365 356 aaKnown RBP eCLIP1.52□□□□□ -2.173e-10■■■□□ 18.2
SMARCB1-209ENST00000635578 TXNRD1Q16881 649 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 NBPF8Q3BBV2 869 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 DALRD3Q5D0E6 543 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 NOMO2Q5JPE7 1267 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 PITRM1Q5JRX3 1037 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 PXDC1Q5TGL8 231 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 KIAA0895LQ68EN5 471 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 DLK2Q6UY11 383 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 DDX46Q7L014 1031 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 PPM1KQ8N3J5 372 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 JMYQ8N9B5 988 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 OR7D4Q8NG98 312 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 OR2W6PQ8NHA6 318 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 MYCBPAPQ8TBZ2 947 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 CASKIN2Q8WXE0 1202 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 TARS2Q9BW92 718 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 SENP6Q9GZR1 1112 aaPredicted RBP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 KCTD10Q9H3F6 313 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 SH3BP4Q9P0V3 963 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 SERGEFQ9UGK8 458 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 KCNG1Q9UIX4 513 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 ZNF112Q9UJU3 913 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 TMPRSS11EQ9UL52 423 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 PROCRQ9UNN8 238 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 PLAAQ9Y263 795 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 NOC2LQ9Y3T9 749 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 NR2E3Q9Y5X4 410 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 CDY2AQ9Y6F7 541 aa1.52□□□□□ -2.17
SMARCB1-209ENST00000635578 RIMS1Q86UR5 1692 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ADCY10Q96PN6 1610 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 DIP2BQ9P265 1576 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TCRBV7S2A1N4TA0A589 114 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 GSG1L2A8MUP6 293 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TARM1B6A8C7 271 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 GCOM1H8Y6P7 765 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PPP6CO00743 305 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ENPP3O14638 875 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 RFPL3O75679 317 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 URI1O94763 535 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TTLL1O95922 423 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 SRGNP10124 158 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 NR2F6P10588 404 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 FCER1AP12319 257 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 CPEP16870 476 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 FPR1P21462 350 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 DRD4P21917 467 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 SFPQP23246 707 aaKnown RBP eCLIP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 GATA3P23771 443 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 KRTAP5-9P26371 169 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 HSD3B2P26439 372 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ECHS1P30084 290 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PER3P56645 1201 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TMPRSS15P98073 1019 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 CDK17Q00537 523 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 OCRLQ01968 901 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 FPGSQ05932 587 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 SLFN5Q08AF3 891 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 CD300EQ496F6 205 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PREPLQ4J6C6 727 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ATP13A4Q4VNC1 1196 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 SLC44A4Q53GD3 710 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 RNF187Q5TA31 235 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 KRTAP5-4Q6L8H1 288 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 Q6ZVL8 140 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 MEPCEQ7L2J0 689 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 SLC41A1Q8IVJ1 513 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PQLC1Q8N2U9 271 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 NANOGP1Q8N7R0 232 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 NRACQ8N912 160 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ZNF610Q8N9Z0 462 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 ATL2Q8NHH9 583 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TBC1D15Q8TC07 691 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 CHAC2Q8WUX2 184 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 RSAD2Q8WXG1 361 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 RIN2Q8WYP3 895 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PGBD1Q96JS3 809 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PPP1R10Q96QC0 940 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 PNKPQ96T60 521 aa1.51□□□□□ -2.17
SMARCB1-209ENST00000635578 TTC1Q99614 292 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms