RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 PROSCO94903 275 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 IQCF3P0C7M6 154 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 CHRM1P11229 460 aaPredicted RBP13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 OSBPP22059 807 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 PROZP22891 400 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 PPARDQ03181 441 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 CST9Q5W186 159 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 EFCAB13Q8IY85 973 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 ATG4AQ8WYN0 398 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 INO80BQ9C086 356 aaPredicted RBP13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 RNPEPQ9H4A4 650 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 GAS2O43903 313 aaKnown RBP13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 HOXC6P09630 235 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 CETPP11597 493 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 GTF2A2P52657 109 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 TAS2R40P59535 323 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 TFAMQ00059 246 aaKnown RBP13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 GUCY1A3Q02108 690 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 GRM1Q13255 1194 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 SNX1Q13596 522 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 ZNF394Q53GI3 561 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 EMC10Q5UCC4 262 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 PLEKHA7Q6IQ23 1121 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 TSHZ1Q6ZSZ6 1077 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 TMEM192Q8IY95 271 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 C12orf50Q8NA57 414 aaPredicted RBP13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 ZNF606Q8WXB4 792 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 MROH8Q9H579 483 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 LRRC19Q9H756 370 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 CHST7Q9NS84 486 aa13.25□□□□□ -0.29
UBASH3A-209ENST00000635325 DCDC2CA8MYV0 355 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 PODXLO00592 558 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 PPFIA4O75335 1185 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 SHBGP04278 402 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 WEE2P0C1S8 567 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 HPDP32754 393 aaPredicted RBP13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 SLC1A1P43005 524 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 FNTAP49354 379 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 AP3M2P53677 418 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 IGBP1P78318 339 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 MBTD1Q05BQ5 628 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 DUOXA2Q1HG44 320 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 ZNF568Q3ZCX4 644 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 SGO2Q562F6 1265 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 LIN9Q5TKA1 542 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 EFCAB12Q6NXP0 572 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 MPZL3Q6UWV2 235 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 SCARA5Q6ZMJ2 495 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 NIF3L1Q9GZT8 377 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 XYLT2Q9H1B5 865 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 C2orf40Q9H1Z8 148 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 FZD8Q9H461 694 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 SMARCAD1Q9H4L7 1026 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 RSPH14Q9UHP6 348 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 ACKR2O00590 384 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 ASPAP45381 313 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 PMS2P54278 862 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 TTLL4Q14679 1199 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 SPRYD7Q5W111 196 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 ANKS1BQ7Z6G8 1248 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 RNF25Q96BH1 459 aaPredicted RBP13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 HEMGNQ9BXL5 484 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 R3HDM2Q9Y2K5 976 aaKnown RBP13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 SLC45A1Q9Y2W3 748 aa13.24□□□□□ -0.29
UBASH3A-209ENST00000635325 TP73O15350 636 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 ZEB2O60315 1214 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 C22orf31O95567 290 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 TCF4P15884 667 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 MMP8P22894 467 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 RPL7AP62424 266 aaKnown RBP13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 ARHGAP1Q07960 439 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 GTF3C2Q8WUA4 911 aaPredicted RBP13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 VCPIP1Q96JH7 1222 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 CDT1Q9H211 546 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 PABPC3Q9H361 631 aaKnown RBP13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 BCCIPQ9P287 314 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 USTQ9Y2C2 406 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
UBASH3A-209ENST00000635325 CCL15-CCL14A0A0B4J2E2 113 aa13.22□□□□□ -0.29
UBASH3A-209ENST00000635325 TLR3O15455 904 aaKnown RBP13.22□□□□□ -0.29
UBASH3A-209ENST00000635325 MEFVO15553 781 aaPredicted RBP13.22□□□□□ -0.29
UBASH3A-209ENST00000635325 HBP1O60381 514 aa13.22□□□□□ -0.29
UBASH3A-209ENST00000635325 ERLIN2O94905 339 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms