RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	ZNF623	O75123	536 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	ITGA4	P13612	1032 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	ACO1	P21399	889 aa	Known RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	PNPLA4	P41247	253 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	PKN2	Q16513	984 aa	Known RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	TRIM71	Q2Q1W2	868 aa	Known RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	TRIM72	Q6ZMU5	477 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	LRRC52	Q8N7C0	313 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	LRRN4CL	Q8ND94	238 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	PGBD4	Q96DM1	585 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	FAM84A	Q96KN4	292 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	APOL6	Q9BWW8	343 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	ERVK-5	Q9HDB9	667 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	UBN1	Q9NPG3	1134 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	SLC38A7	Q9NVC3	462 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	NOCT	Q9UK39	431 aa	Known RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	NENF	Q9UMX5	172 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	HES2	Q9Y543	173 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	MACROD2	A1Z1Q3	448 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	ANKRD62	A6NC57	917 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	RCCD1	A6NED2	376 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	CKB	P12277	381 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	POLR2B	P30876	1174 aa	Known RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	TNNC1	P63316	161 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	ZNF618	Q5T7W0	954 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	SMG8	Q8ND04	991 aa	Known RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	LNX1	Q8TBB1	728 aa	Predicted RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	NAPG	Q99747	312 aa	Predicted RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	ISCU	Q9H1K1	167 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	CISH	Q9NSE2	258 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	NXF1	Q9UBU9	619 aa	Known RBP	13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	GIT1	Q9Y2X7	761 aa		13.41	□□□□□ -0.26
PATJ-215	ENST00000635137	MYH10	P35580	1976 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	PDCD11	Q14690	1871 aa	Known RBP	13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	SMIM28	A0A1B0GU29	152 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	ANO9	A1A5B4	782 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	MEFV	O15553	781 aa	Predicted RBP	13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	TMEM253	P0C7T8	217 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	GHR	P10912	638 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	CAPN2	P17655	700 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	AKAP5	P24588	427 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	GNA15	P30679	374 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	CDK7	P50613	346 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	CTU1	Q7Z7A3	348 aa	Known RBP	13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	NOP9	Q86U38	636 aa	Known RBP	13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	SLC35F6	Q8N357	371 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	ZNF560	Q96MR9	790 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	WDR24	Q96S15	920 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	BCO2	Q9BYV7	579 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	IRX2	Q9BZI1	471 aa	Predicted RBP	13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	TRPV6	Q9H1D0	765 aa		13.4	□□□□□ -0.26
PATJ-215	ENST00000635137	CEP350	Q5VT06	3117 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137		A0A0U1RQJ8	604 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	CD52	P31358	61 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	LPIN1	Q14693	890 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	MRPL10	Q7Z7H8	261 aa	Known RBP	13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	CXorf38	Q8TB03	319 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	ATRIP	Q8WXE1	791 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	RPS6KC1	Q96S38	1066 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	FTHL17	Q9BXU8	183 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	JRKL	Q9Y4A0	524 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	MED7	O43513	233 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	URI1	O94763	535 aa	Predicted RBP	13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	ASPA	P45381	313 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	GALC	P54803	685 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	FMO1	Q01740	532 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	RHOT2	Q8IXI1	618 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	UBR7	Q8N806	425 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	SLC20A1	Q8WUM9	679 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	DDX1	Q92499	740 aa	Known RBP	13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	TRIM11	Q96F44	468 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	AGO3	Q9H9G7	860 aa	Known RBP	13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	TRIM10	Q9UDY6	481 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137	DUSP10	Q9Y6W6	482 aa		13.39	□□□□□ -0.27
PATJ-215	ENST00000635137		A0A0U1RQF3	1178 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	PARN	O95453	639 aa	Known RBP	13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	ABL1	P00519	1130 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	FTL	P02792	175 aa	Predicted RBP	13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	MME	P08473	750 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	PAEP	P09466	180 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	ZNF132	P52740	706 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	MTFR1	Q15390	333 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	ZMAT2	Q96NC0	199 aa	Known RBP	13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	KIAA1257	Q9ULG3	409 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	UMODL1	Q5DID0	1318 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	PITPNM1	O00562	1244 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	WEE2	P0C1S8	567 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	SELP	P16109	830 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	CHRNB2	P17787	502 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	CD58	P19256	250 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	NOP2	P46087	812 aa	Known RBP	13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	GPC5	P78333	572 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	C9orf57	Q5W0N0	161 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	ACAD10	Q6JQN1	1059 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	SYCE1	Q8N0S2	351 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	DNAJC5G	Q8N7S2	189 aa		13.38	□□□□□ -0.27
PATJ-215	ENST00000635137	ELMO3	Q96BJ8	720 aa		13.38	□□□□□ -0.27

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