RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GTPBP10A4D1E9 387 aaKnown RBP15.53■□□□□ 0.08
LINC00339-208ENST00000634934 LRRN2O75325 713 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 EPC2Q52LR7 807 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 WDR44Q5JSH3 913 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 FIBCD1Q8N539 461 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 EHBP1Q8NDI1 1231 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 CXorf38Q8TB03 319 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 HPDLQ96IR7 371 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 IMPG2Q9BZV3 1241 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 YBX2Q9Y2T7 364 aaKnown RBP15.53■□□□□ 0.08
LINC00339-208ENST00000634934 PRG3Q9Y2Y8 225 aaPredicted RBP15.53■□□□□ 0.08
LINC00339-208ENST00000634934 COQ4Q9Y3A0 265 aa15.53■□□□□ 0.08
LINC00339-208ENST00000634934 MRPL42Q9Y6G3 142 aaKnown RBP15.53■□□□□ 0.08
LINC00339-208ENST00000634934 CHD7Q9P2D1 2997 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 ANO9A1A5B4 782 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 PIRO00625 290 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 ALDH2P05091 517 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 SLC9A1P19634 815 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 KLK7P49862 253 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 SMAD3P84022 425 aaKnown RBP15.52■□□□□ 0.07
LINC00339-208ENST00000634934 MYO1EQ12965 1108 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 PTPN14Q15678 1187 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 UPP1Q16831 310 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 SGSM1Q2NKQ1 1148 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 ZNF699Q32M78 642 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 ZNF560Q96MR9 790 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 LSM14BQ9BX40 385 aaKnown RBP15.52■□□□□ 0.07
LINC00339-208ENST00000634934 CWH43Q9H720 699 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 FAN1Q9Y2M0 1017 aa15.52■□□□□ 0.07
LINC00339-208ENST00000634934 B3GAT3O94766 335 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 DNAJB2P25686 324 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 PON1P27169 355 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 ATICP31939 592 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 PBX3P40426 434 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 SLC11A1P49279 550 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 ALDH7A1P49419 539 aaKnown RBP15.51■□□□□ 0.07
LINC00339-208ENST00000634934 BCAR1P56945 870 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 KCNMA1Q12791 1236 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 SPOPLQ6IQ16 392 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 DCLRE1AQ6PJP8 1040 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 Q7L0L9 218 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 LRRC52Q8N7C0 313 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 HASPINQ8TF76 798 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 ERGIC2Q96RQ1 377 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 TMEM175Q9BSA9 504 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 L2HGDHQ9H9P8 463 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 NUB1Q9Y5A7 615 aa15.51■□□□□ 0.07
LINC00339-208ENST00000634934 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 FNDC1Q4ZHG4 1894 aaPredicted RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 COL4A6Q14031 1691 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 LCHNA4D1U4 455 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 NT5C1B-RDH14C9J2C7 533 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 F8W810 466 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 NRP1O14786 923 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 ARHGEF15O94989 841 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 KIF4AO95239 1232 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 ASS1P00966 412 aaKnown RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 GALTP07902 379 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 IGFBP6P24592 240 aaPredicted RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 PNPLA4P41247 253 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 TAF6P49848 677 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 NOP14P78316 857 aaKnown RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 APBA1Q02410 837 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 WDR72Q3MJ13 1102 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 TRIM65Q6PJ69 517 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 C3orf58Q8NDZ4 430 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 LMO3Q8TAP4 145 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 TAF4BQ92750 862 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 C16orf45Q96MC5 204 aaPredicted RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 NT5C1BQ96P26 610 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 COLEC11Q9BWP8 271 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 XYLT2Q9H1B5 865 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 FAM207AQ9NSI2 230 aaPredicted RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 NXF1Q9UBU9 619 aaKnown RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 SIK3Q9Y2K2 1263 aa15.5■□□□□ 0.07
LINC00339-208ENST00000634934 TDRD15B5MCY1 1934 aaKnown RBP15.5■□□□□ 0.07
LINC00339-208ENST00000634934 A0A1W2PQC6 194 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 SPTLC1O15269 473 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 TADA2AO75478 443 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 CA3P07451 260 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 LAG3P18627 525 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 LILRA4P59901 499 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 SV2CQ496J9 727 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 ZNF667Q5HYK9 610 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 KCNT2Q6UVM3 1135 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 SPRED2Q7Z698 418 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 SP7Q8TDD2 431 aaPredicted RBP15.49■□□□□ 0.07
LINC00339-208ENST00000634934 TATDN2Q93075 761 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 FAM161BQ96MY7 647 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 ZNF558Q96NG5 402 aa15.49■□□□□ 0.07
LINC00339-208ENST00000634934 APOBEC3GQ9HC16 384 aaKnown RBP15.49■□□□□ 0.07
LINC00339-208ENST00000634934 KPNA7A9QM74 516 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 ITGB1P05556 798 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 TNNC1P63316 161 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 GJB7Q6PEY0 223 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 DSTYKQ6XUX3 929 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 SCARA5Q6ZMJ2 495 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 COLGALT1Q8NBJ5 622 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms