RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 TRIM49CP0CI26 452 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 PPP3CAQ08209 521 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 MRPL58Q14197 206 aaKnown RBP20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 CCDC85BQ15834 202 aaPredicted RBP20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 DUSP6Q16828 381 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 SKOR2Q2VWA4 1001 aaPredicted RBP20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 ZACNQ401N2 412 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 TDRD10Q5VZ19 366 aaKnown RBP20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 SV2AQ7L0J3 742 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 FRMD5Q7Z6J6 570 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 CEP57Q86XR8 500 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 PPP2R3CQ969Q6 453 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 SENP8Q96LD8 212 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 ZNF560Q96MR9 790 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 TLE6Q9H808 572 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 ANO10Q9NW15 660 aa20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 ARMCX3Q9UH62 379 aaPredicted RBP20.91■□□□□ 0.94
CROCCP4-202ENST00000633627 PRUNE2Q8WUY3 3088 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 KPNA7A9QM74 516 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 C2CD2LO14523 706 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 KRT19P08727 400 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 GTF2F1P35269 517 aaKnown RBP eCLIP20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 NRIP1P48552 1158 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 MARSP56192 900 aaKnown RBP20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 SV2CQ496J9 727 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 PRSS55Q6UWB4 352 aaPredicted RBP20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 DSTYKQ6XUX3 929 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 KLHL5Q96PQ7 755 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 METTL14Q9HCE5 456 aaKnown RBP20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 FNIP2Q9P278 1114 aa20.9■□□□□ 0.94
CROCCP4-202ENST00000633627 PER2O15055 1255 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 TEX28O15482 410 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 TBC1D4O60343 1298 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 CLASP2O75122 1294 aaKnown RBP20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 VNN1O95497 513 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 TYMPP19971 482 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 GTF2H1P32780 548 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 KCNC3Q14003 757 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 PSMD5Q16401 504 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 STX1AQ16623 288 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 VARS2Q5ST30 1063 aaKnown RBP20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 PDXDC1Q6P996 788 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 RBM23Q86U06 439 aaKnown RBP20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 IRF2BP1Q8IU81 584 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 APPL2Q8NEU8 664 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 HPDLQ96IR7 371 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 CDCA3Q99618 268 aaPredicted RBP20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 XYLT2Q9H1B5 865 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 GDAP2Q9NXN4 497 aa20.89■□□□□ 0.93
CROCCP4-202ENST00000633627 FGFR1OPO95684 399 aaKnown RBP20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 STAU1O95793 577 aaKnown RBP20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 GNA14O95837 355 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 CYP11A1P05108 521 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 GCLMP48507 274 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 TYRO3Q06418 890 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 BIRC3Q13489 604 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 CTC1Q2NKJ3 1217 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 C11orf57Q6ZUT1 292 aaPredicted RBP20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 ANKS3Q6ZW76 656 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 EFHBQ8N7U6 833 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 PPM1EQ8WY54 764 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 SLC35C1Q96A29 364 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 CLSTN3Q9BQT9 956 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 EMILIN2Q9BXX0 1053 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 MTRRQ9UBK8 725 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 TIMM13Q9Y5L4 95 aaPredicted RBP20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 BACE2Q9Y5Z0 518 aa20.88■□□□□ 0.93
CROCCP4-202ENST00000633627 CYB561D2O14569 222 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 NCK2O43639 380 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 OAZ2O95190 189 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 LETM1O95202 739 aaPredicted RBP20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 RPL17P18621 184 aaKnown RBP20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 CA8P35219 290 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 MYL6P60660 151 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 CREMQ03060 361 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 MYO1EQ12965 1108 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 ADAM15Q13444 863 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 NCOA4Q13772 614 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 CCDC40Q4G0X9 1142 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 RSPO2Q6UXX9 243 aaPredicted RBP20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 LIMS2Q7Z4I7 341 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 TRIM59Q8IWR1 403 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 SLC22A17Q8WUG5 538 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 FUCA2Q9BTY2 467 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 VRTNQ9H8Y1 702 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 TMEM8AQ9HCN3 771 aa20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 R3HCC1Q9Y3T6 440 aaKnown RBP20.87■□□□□ 0.93
CROCCP4-202ENST00000633627 ARHGEF37A1IGU5 675 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 STX10O60499 249 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 PHACTR2O75167 634 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 ODC1P11926 461 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 ATICP31939 592 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 TRPC3Q13507 836 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 VN1R2Q8NFZ6 395 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 ENOX1Q8TC92 643 aaKnown RBP20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 PABPC5Q96DU9 382 aaKnown RBP20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 THAP9Q9H5L6 903 aa20.86■□□□□ 0.93
CROCCP4-202ENST00000633627 IGFLR1Q9H665 355 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms