RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.33
NRXN1-229ENST00000628515 RFWD3Q6PCD5 774 aa17.08■□□□□ 0.33
NRXN1-229ENST00000628515 ACSF2Q96CM8 615 aaPredicted RBP17.08■□□□□ 0.33
NRXN1-229ENST00000628515 NT5C1BQ96P26 610 aa17.08■□□□□ 0.33
NRXN1-229ENST00000628515 C11orf70Q9BRQ4 267 aa17.08■□□□□ 0.33
NRXN1-229ENST00000628515 LRMDAQ9H2I8 198 aa17.08■□□□□ 0.33
NRXN1-229ENST00000628515 GRID1Q9ULK0 1009 aa17.08■□□□□ 0.33
NRXN1-229ENST00000628515 CFAP69A5D8W1 941 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 MAP3K13O43283 966 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 MIER3Q7Z3K6 550 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 HAUS6Q7Z4H7 955 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 ZBED8Q8IZ13 594 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 KIFAP3Q92845 792 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 IPO5O00410 1097 aaKnown RBP17.08■□□□□ 0.32
NRXN1-229ENST00000628515 DCTN3O75935 186 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 GNAT1P11488 350 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 ZBTB16Q05516 673 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 ZNF568Q3ZCX4 644 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 ATP13A4Q4VNC1 1196 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 ACAD10Q6JQN1 1059 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 CCDC89Q8N998 374 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 DNAJC9Q8WXX5 260 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 TEKT3Q9BXF9 490 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 FHDC1Q9C0D6 1143 aaPredicted RBP17.08■□□□□ 0.32
NRXN1-229ENST00000628515 PIDD1Q9HB75 910 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 KIAA1586Q9HCI6 787 aa17.08■□□□□ 0.32
NRXN1-229ENST00000628515 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 CEP55Q53EZ4 464 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 FAM102BQ5T8I3 360 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 RSBN1LQ6PCB5 846 aaPredicted RBP17.07■□□□□ 0.32
NRXN1-229ENST00000628515 LVRNQ6Q4G3 990 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 NLRP9Q7RTR0 991 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 NYAP2Q9P242 653 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 NEU2Q9Y3R4 380 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 RFC5P40937 340 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 SNRNP35Q16560 246 aaKnown RBP17.07■□□□□ 0.32
NRXN1-229ENST00000628515 CC2D2BQ6DHV5 1058 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 TRABD2AQ86V40 505 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
NRXN1-229ENST00000628515 ASMTLO95671 621 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 GPS1Q13098 491 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 NFIL3Q16649 462 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 ARMC3Q5W041 872 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 SCYL3Q8IZE3 742 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 UCMAQ8WVF2 138 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 CFAP57Q96MR6 1250 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 SH3GL3Q99963 347 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 OSBPL8Q9BZF1 889 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 SORBS3O60504 671 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 GNAZP19086 355 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 SKIV2L2P42285 1042 aaKnown RBP17.06■□□□□ 0.32
NRXN1-229ENST00000628515 TAS2R40P59535 323 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 FAM182AQ5T1J6 154 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 TEKT4Q8WW24 435 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 SHC3Q92529 594 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 SLC7A6OSQ96CW6 309 aaPredicted RBP17.06■□□□□ 0.32
NRXN1-229ENST00000628515 TMEM206Q9H813 350 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 FBXO28Q9NVF7 368 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 ZNF70Q9UC06 446 aaPredicted RBP17.06■□□□□ 0.32
NRXN1-229ENST00000628515 T-ENOLP0DO92 83 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 PIK3CAP42336 1068 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 POLE2P56282 527 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 CAV1Q03135 178 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 ZC3H18Q86VM9 953 aaKnown RBP17.06■□□□□ 0.32
NRXN1-229ENST00000628515 MAIP1Q8WWC4 291 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 STARD13Q9Y3M8 1113 aa17.06■□□□□ 0.32
NRXN1-229ENST00000628515 UBE4BO95155 1302 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 ATP5HO75947 161 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 MTA2O94776 668 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 KRT4P19013 534 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 MAN1A1P33908 653 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 NSFP46459 744 aaKnown RBP17.05■□□□□ 0.32
NRXN1-229ENST00000628515 RASSF2P50749 326 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 ARSEP51690 589 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
NRXN1-229ENST00000628515 KLC1Q07866 573 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 PPP2R5CQ13362 524 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 ACVR2BQ13705 512 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 RCN2Q14257 317 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 RCN1Q15293 331 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 KHDC1Q4VXA5 237 aaKnown RBP17.05■□□□□ 0.32
NRXN1-229ENST00000628515 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
NRXN1-229ENST00000628515 FYB2Q5VWT5 728 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 KRT39Q6A163 491 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 SLC30A9Q6PML9 568 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 OTOAQ7RTW8 1153 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 MAML1Q92585 1016 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 TCEAL9Q9UHQ7 104 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 LGALS13Q9UHV8 139 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 SUGT1Q9Y2Z0 365 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 PECAM1P16284 738 aaPredicted RBP17.05■□□□□ 0.32
NRXN1-229ENST00000628515 PSMC4P43686 418 aa17.05■□□□□ 0.32
NRXN1-229ENST00000628515 EFTUD2Q15029 972 aaKnown RBP eCLIP17.05■□□□□ 0.32
NRXN1-229ENST00000628515 RNF220Q5VTB9 566 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms