RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TMC2Q8TDI7 906 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 PARD3BQ8TEW8 1205 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 PAAF1Q9BRP4 392 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 HERC2P3Q9BVR0 1158 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 SRRTQ9BXP5 876 aaKnown RBP15.89■□□□□ 0.13
PNKP-221ENST00000627317 MTMR12Q9C0I1 747 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 INTS13Q9NVM9 706 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 ARMCX3Q9UH62 379 aaPredicted RBP15.89■□□□□ 0.13
PNKP-221ENST00000627317 HCFC2Q9Y5Z7 792 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 PTPRJQ12913 1337 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.88■□□□□ 0.13
PNKP-221ENST00000627317 LRRIQ3A6PVS8 624 aaPredicted RBP15.88■□□□□ 0.13
PNKP-221ENST00000627317 KIF4AO95239 1232 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 CXCL14O95715 111 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 GNA14O95837 355 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 LRPAP1P30533 357 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 CLCNKBP51801 687 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 DUOXA2Q1HG44 320 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 TCERG1LQ5VWI1 586 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 ANKRD54Q6NXT1 300 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 TAS1R1Q7RTX1 841 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 FILIP1Q7Z7B0 1213 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 ADHFE1Q8IWW8 467 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 OR5B17Q8NGF7 314 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 PLEKHO2Q8TD55 490 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 HASPINQ8TF76 798 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 SLC22A17Q8WUG5 538 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 FAM84AQ96KN4 292 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 POP1Q99575 1024 aaKnown RBP15.88■□□□□ 0.13
PNKP-221ENST00000627317 METTL14Q9HCE5 456 aaKnown RBP15.88■□□□□ 0.13
PNKP-221ENST00000627317 DPP3Q9NY33 737 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 FAM50BQ9Y247 325 aa15.88■□□□□ 0.13
PNKP-221ENST00000627317 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
PNKP-221ENST00000627317 USP15Q9Y4E8 981 aaPredicted RBP15.88■□□□□ 0.13
PNKP-221ENST00000627317 TRIOO75962 3097 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 TADA2AO75478 443 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 B3GAT3O94766 335 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 SOD2P04179 222 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 TRIM49P0CI25 452 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 TRIM49CP0CI26 452 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 AP3M2P53677 418 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 ENPEPQ07075 957 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 BIRC3Q13489 604 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 UPP1Q16831 310 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 DCAF17Q5H9S7 520 aaPredicted RBP15.87■□□□□ 0.13
PNKP-221ENST00000627317 DCLRE1AQ6PJP8 1040 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 FRMD5Q7Z6J6 570 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 FAM114A1Q8IWE2 563 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 GJD3Q8N144 294 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 TMEM130Q8N3G9 435 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 MED15Q96RN5 788 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 GZF1Q9H116 711 aaPredicted RBP15.87■□□□□ 0.13
PNKP-221ENST00000627317 CHST7Q9NS84 486 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 ADAM28Q9UKQ2 775 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 ITGA11Q9UKX5 1188 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 NUB1Q9Y5A7 615 aa15.87■□□□□ 0.13
PNKP-221ENST00000627317 TMEM189-UBE2V1I3L0A0 370 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 STX10O60499 249 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 PHACTR2O75167 634 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 ITGB3P05106 788 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 KRT19P08727 400 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 CNPP09543 421 aaKnown RBP15.86■□□□□ 0.13
PNKP-221ENST00000627317 HOXB8P17481 243 aaPredicted RBP15.86■□□□□ 0.13
PNKP-221ENST00000627317 POLR2BP30876 1174 aaKnown RBP15.86■□□□□ 0.13
PNKP-221ENST00000627317 DLG4P78352 724 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 MYL5Q02045 173 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 KIAA0319Q5VV43 1072 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 C9orf57Q5W0N0 161 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 LLGL2Q6P1M3 1020 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 C1orf127Q8N9H9 656 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 ENOX1Q8TC92 643 aaKnown RBP15.86■□□□□ 0.13
PNKP-221ENST00000627317 BORCS6Q96GS4 357 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 CNOT6LQ96LI5 555 aaKnown RBP15.86■□□□□ 0.13
PNKP-221ENST00000627317 ZNF560Q96MR9 790 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 FUCA2Q9BTY2 467 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 GPR62Q9BZJ7 368 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 THAP9Q9H5L6 903 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 MMRN2Q9H8L6 949 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 MAGEC2Q9UBF1 373 aaPredicted RBP15.86■□□□□ 0.13
PNKP-221ENST00000627317 NFE2L3Q9Y4A8 694 aa15.86■□□□□ 0.13
PNKP-221ENST00000627317 SF3B1O75533 1304 aaKnown RBP eCLIP15.86■□□□□ 0.137e-7■■■■■ 86
PNKP-221ENST00000627317 ANO9A1A5B4 782 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 IKBKBO14920 756 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 TRAPPC3O43617 180 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 CLSTN1O94985 981 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 EPCAMP16422 314 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 CLDN10P78369 228 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 RBP5P82980 135 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 DSG1Q02413 1049 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 ELAVL2Q12926 359 aaKnown RBP15.85■□□□□ 0.13
PNKP-221ENST00000627317 FUT10Q6P4F1 479 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 TRAPPC11Q7Z392 1133 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 CREBRFQ8IUR6 639 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 GPR65Q8IYL9 337 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 AOPEPQ8N6M6 819 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 C3orf58Q8NDZ4 430 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 CASP10Q92851 521 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 KLHL5Q96PQ7 755 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 RXFP1Q9HBX9 757 aa15.85■□□□□ 0.13
PNKP-221ENST00000627317 AGAP1Q9UPQ3 857 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms