RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 MARCKSP29966 332 aaPredicted RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 LTBRP36941 435 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 ADH7P40394 386 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 SLC12A3P55017 1021 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 GRIK3Q13003 919 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 RESTQ13127 1097 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 SMAD4Q13485 552 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 COL19A1Q14993 1142 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 KARSQ15046 597 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 STK38Q15208 465 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 DUSP6Q16828 381 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 TMEM119Q4V9L6 283 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 KIAA1841Q6NSI8 718 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 KCNK18Q7Z418 384 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 GPBP1Q86WP2 473 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 MYCT1Q8N699 235 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 MRPL43Q8N983 215 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 RAD54LQ92698 747 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 CASP10Q92851 521 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 BICD1Q96G01 975 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 NECAB3Q96P71 396 aaPredicted RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 POP1Q99575 1024 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 CCDC94Q9BW85 323 aaPredicted RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 EMILIN2Q9BXX0 1053 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 CCDC113Q9H0I3 377 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 ZHX3Q9H4I2 956 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 PDZD7Q9H5P4 517 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 MRPL17Q9NRX2 175 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 SNTG2Q9NY99 539 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 KLK14Q9P0G3 267 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 PRKAG3Q9UGI9 489 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 ODF2LQ9ULJ1 636 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 MTMR6Q9Y217 621 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 TNFSF13BQ9Y275 285 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 GDAQ9Y2T3 454 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 PRG3Q9Y2Y8 225 aaPredicted RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 SRPRBQ9Y5M8 271 aaKnown RBP7.01□□□□□ -1.29
TCF4-249ENST00000625716 ARID2Q68CP9 1835 aa7.01□□□□□ -1.29
TCF4-249ENST00000625716 ZMYM2Q9UBW7 1377 aa7□□□□□ -1.29
TCF4-249ENST00000625716 NPHP3-ACAD11A0A0J9YXS1 232 aa7□□□□□ -1.29
TCF4-249ENST00000625716 C2orf71A6NGG8 1288 aa7□□□□□ -1.29
TCF4-249ENST00000625716 HIDE1A8MVS5 230 aa7□□□□□ -1.29
TCF4-249ENST00000625716 INPPL1O15357 1258 aa7□□□□□ -1.29
TCF4-249ENST00000625716 MBTPS2O43462 519 aa7□□□□□ -1.29
TCF4-249ENST00000625716 TBX10O75333 385 aa7□□□□□ -1.29
TCF4-249ENST00000625716 URODP06132 367 aa7□□□□□ -1.29
TCF4-249ENST00000625716 CTSAP10619 480 aa7□□□□□ -1.29
TCF4-249ENST00000625716 PLCG1P19174 1290 aa7□□□□□ -1.29
TCF4-249ENST00000625716 SCP2P22307 547 aa7□□□□□ -1.29
TCF4-249ENST00000625716 KLRC2P26717 231 aa7□□□□□ -1.29
TCF4-249ENST00000625716 GRNP28799 593 aaKnown RBP7□□□□□ -1.29
TCF4-249ENST00000625716 ABCD1P33897 745 aa7□□□□□ -1.29
TCF4-249ENST00000625716 DDIT3P35638 169 aa7□□□□□ -1.29
TCF4-249ENST00000625716 AFF1P51825 1210 aaKnown RBP7□□□□□ -1.29
TCF4-249ENST00000625716 SEC13P55735 322 aa7□□□□□ -1.29
TCF4-249ENST00000625716 DLX2Q07687 328 aaPredicted RBP7□□□□□ -1.29
TCF4-249ENST00000625716 COASYQ13057 564 aa7□□□□□ -1.29
TCF4-249ENST00000625716 SLC39A14Q15043 492 aa7□□□□□ -1.29
TCF4-249ENST00000625716 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
TCF4-249ENST00000625716 ZNF568Q3ZCX4 644 aa7□□□□□ -1.29
TCF4-249ENST00000625716 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
TCF4-249ENST00000625716 SPECC1Q5M775 1068 aa7□□□□□ -1.29
TCF4-249ENST00000625716 NT5DC1Q5TFE4 455 aa7□□□□□ -1.29
TCF4-249ENST00000625716 RRAGBQ5VZM2 374 aa7□□□□□ -1.29
TCF4-249ENST00000625716 CES5AQ6NT32 575 aa7□□□□□ -1.29
TCF4-249ENST00000625716 FAM173BQ6P4H8 233 aa7□□□□□ -1.29
TCF4-249ENST00000625716 ELMSAN1Q6PJG2 1045 aa7□□□□□ -1.29
TCF4-249ENST00000625716 PPFIBP1Q86W92 1011 aa7□□□□□ -1.29
TCF4-249ENST00000625716 FAM178BQ8IXR5 827 aa7□□□□□ -1.29
TCF4-249ENST00000625716 COLGALT2Q8IYK4 626 aa7□□□□□ -1.29
TCF4-249ENST00000625716 DAW1Q8N136 415 aa7□□□□□ -1.29
TCF4-249ENST00000625716 GJD3Q8N144 294 aa7□□□□□ -1.29
TCF4-249ENST00000625716 FOXD4L4Q8WXT5 416 aaPredicted RBP7□□□□□ -1.29
TCF4-249ENST00000625716 AUTS2Q8WXX7 1259 aa7□□□□□ -1.29
TCF4-249ENST00000625716 LARP4BQ92615 738 aaKnown RBP7□□□□□ -1.29
TCF4-249ENST00000625716 ACAP3Q96P50 834 aa7□□□□□ -1.29
TCF4-249ENST00000625716 ACO2Q99798 780 aaKnown RBP7□□□□□ -1.29
TCF4-249ENST00000625716 NTPCRQ9BSD7 190 aaKnown RBP7□□□□□ -1.29
TCF4-249ENST00000625716 CCSER1Q9C0I3 900 aa7□□□□□ -1.29
TCF4-249ENST00000625716 ZBP1Q9H171 429 aa7□□□□□ -1.29
TCF4-249ENST00000625716 PARVGQ9HBI0 331 aa7□□□□□ -1.29
TCF4-249ENST00000625716 TOPORSQ9NS56 1045 aaPredicted RBP7□□□□□ -1.29
TCF4-249ENST00000625716 MIOSQ9NXC5 875 aa7□□□□□ -1.29
TCF4-249ENST00000625716 CLEC1BQ9P126 229 aa7□□□□□ -1.29
TCF4-249ENST00000625716 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
TCF4-249ENST00000625716 BARX2Q9UMQ3 279 aaPredicted RBP7□□□□□ -1.29
TCF4-249ENST00000625716 USP20Q9Y2K6 914 aa7□□□□□ -1.29
TCF4-249ENST00000625716 FNDC1Q4ZHG4 1894 aaPredicted RBP7□□□□□ -1.29
TCF4-249ENST00000625716 LAMA2P24043 3122 aaKnown RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 CDH23Q9H251 3354 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 K7ENM7 598 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 CLASP2O75122 1294 aaKnown RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 RECQL4O94761 1208 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 SOD2P04179 222 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 MCF2P10911 925 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 HARSP12081 509 aaKnown RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 HOXB8P17481 243 aaPredicted RBP6.99□□□□□ -1.29
TCF4-249ENST00000625716 GATA4P43694 442 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 GLUD2P49448 558 aa6.99□□□□□ -1.29
TCF4-249ENST00000625716 LIG4P49917 911 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms