RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 DNAJB5O75953 348 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 INHBBP09529 407 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 TYRP1P17643 537 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 GNAT2P19087 354 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 RAB32Q13637 225 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 KLHDC7AQ5VTJ3 777 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 LMBRD2Q68DH5 695 aaPredicted RBP5.96□□□□□ -1.46
CPNE3-213ENST00000622183 DRICH1Q6PGQ1 229 aaPredicted RBP5.96□□□□□ -1.46
CPNE3-213ENST00000622183 XYLT1Q86Y38 959 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 SP8Q8IXZ3 490 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 PCSK9Q8NBP7 692 aaKnown RBP5.96□□□□□ -1.46
CPNE3-213ENST00000622183 SCAMP4Q969E2 229 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 HERPUD2Q9BSE4 406 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 SERHLQ9NQF3 203 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 MYO1AQ9UBC5 1043 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 RGS17Q9UGC6 210 aaPredicted RBP5.96□□□□□ -1.46
CPNE3-213ENST00000622183 CDC23Q9UJX2 597 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 CLCA2Q9UQC9 943 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 PCDHGB2Q9Y5G2 931 aa5.96□□□□□ -1.46
CPNE3-213ENST00000622183 A0A087WV62 115 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 A0A087WWL8 130 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 ZNF785A8K8V0 405 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 ADAMTS3O15072 1205 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 LAMTOR5O43504 91 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 UNC5CO95185 931 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 CHEK2O96017 543 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 HSPA7P48741 367 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 PSMC1P62191 440 aaKnown RBP5.95□□□□□ -1.46
CPNE3-213ENST00000622183 POU6F2P78424 691 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-213ENST00000622183 MXRA7P84157 204 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 GRM7Q14831 915 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 CSRP2Q16527 193 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 ARL13BQ3SXY8 428 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 METTL24Q5JXM2 366 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 UTP14CQ5TAP6 766 aaKnown RBP5.95□□□□□ -1.46
CPNE3-213ENST00000622183 SLFN13Q68D06 897 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 EFCAB12Q6NXP0 572 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 ANKRD42Q8N9B4 389 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 OR52N2Q8NGI0 321 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 IQCDQ96DY2 449 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 TMEM41AQ96HV5 264 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 CPPED1Q9BRF8 314 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-213ENST00000622183 CPEB1Q9BZB8 566 aaKnown RBP5.95□□□□□ -1.46
CPNE3-213ENST00000622183 TINAGL1Q9GZM7 467 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-213ENST00000622183 SIK2Q9H0K1 926 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 A1CFQ9NQ94 594 aaKnown RBP5.95□□□□□ -1.46
CPNE3-213ENST00000622183 PLEKHM1Q9Y4G2 1056 aa5.95□□□□□ -1.46
CPNE3-213ENST00000622183 CDHR4A6H8M9 788 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 MBD3L4A6NDZ8 208 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 MBD3L3A6NE82 208 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 PAX4O43316 350 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 NBNO60934 754 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 IPO13O94829 963 aaKnown RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 AGFG2O95081 481 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 MT-ND5P03915 603 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 ANXA2P07355 339 aaKnown RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 HARSP12081 509 aaKnown RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 FGFR2P21802 821 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 HALP42357 657 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 TECP42680 631 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 SLC11A2P49281 568 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 ZNF135P52742 658 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 MAPK10P53779 464 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 TCF15Q12870 199 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 CTBP1Q13363 440 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 RAPGEF1Q13905 1077 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 TRIM14Q14142 442 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 SLC35G1Q2M3R5 365 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 TMEM95Q3KNT9 176 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 CRB2Q5IJ48 1285 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 BEND5Q7L4P6 421 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 USP37Q86T82 979 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 TAX1BP1Q86VP1 789 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 FITM2Q8N6M3 262 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 DNAJC5GQ8N7S2 189 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 RNF169Q8NCN4 708 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 ZSCAN18Q8TBC5 510 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 ST8SIA2Q92186 375 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 TMEM176AQ96HP8 235 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 SNX22Q96L94 193 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 MPHOSPH9Q99550 1183 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 TTLL2Q9BWV7 592 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 USP40Q9NVE5 1235 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 PLA2G3Q9NZ20 509 aa5.94□□□□□ -1.46
CPNE3-213ENST00000622183 HECAQ9UBI9 543 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-213ENST00000622183 CLCA1A8K7I4 914 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 PYCARD-AS1I3L0S3 204 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 THAP12O43422 761 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 PIP5K1CO60331 668 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 GRPP07492 148 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 PIM1P11309 404 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-213ENST00000622183 IL1R1P14778 569 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 SLC6A2P23975 617 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 MGAT1P26572 445 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 KLRC1P26715 233 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 UCP3P55916 312 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 PDCD2Q16342 344 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-213ENST00000622183 MPEG1Q2M385 716 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 TUBB8Q3ZCM7 444 aa5.93□□□□□ -1.46
CPNE3-213ENST00000622183 HSP90AB4PQ58FF6 505 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms