RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 GRHL1Q9NZI5 618 aa18.64■□□□□ 0.57
FAM3A-222ENST00000621967 TRPC6Q9Y210 931 aa18.64■□□□□ 0.57
FAM3A-222ENST00000621967 ATP8A1Q9Y2Q0 1164 aa18.64■□□□□ 0.57
FAM3A-222ENST00000621967 PCDHA3Q9Y5H8 950 aa18.64■□□□□ 0.57
FAM3A-222ENST00000621967 MARK3P27448 753 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 GBP1P32455 592 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 USP8P40818 1118 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 NPTX2P47972 431 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 SLC26A2P50443 739 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 SEC24CP53992 1094 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 MESDQ14696 234 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 KRT71Q3SY84 523 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 FAM102BQ5T8I3 360 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 SEL1L2Q5TEA6 688 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 LHX8Q68G74 356 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 C18orf8Q96DM3 657 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 MFSD14AQ96MC6 490 aa18.63■□□□□ 0.57
FAM3A-222ENST00000621967 NOVA2Q9UNW9 492 aaKnown RBP18.63■□□□□ 0.57
FAM3A-222ENST00000621967 PODXLO00592 558 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 ZNF862O60290 1169 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 MMEP08473 750 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 CYP11B1P15538 503 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 GTF2H1P32780 548 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 SMTNP53814 917 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 CDR2Q01850 454 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 ENPEPQ07075 957 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 TTC27Q6P3X3 843 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 ANO5Q75V66 913 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 ZNF564Q8TBZ8 553 aaPredicted RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 SPIRE2Q8WWL2 714 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 SAAL1Q96ER3 474 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 FAM167AQ96KS9 214 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 NTPCRQ9BSD7 190 aaKnown RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 PABPC3Q9H361 631 aaKnown RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 LRRC4CQ9HCJ2 640 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 UVRAGQ9P2Y5 699 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 CNOT8Q9UFF9 292 aaKnown RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 SEPT9Q9UHD8 586 aaPredicted RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 FRMPD3Q5JV73 1810 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 TMEM110-MUSTN1A8MSY1 372 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 H3BRB1 525 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 MEFVO15553 781 aaPredicted RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 ATMINO43313 823 aaPredicted RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 TRAPPC3O43617 180 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 KPNA6O60684 536 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 OATP04181 439 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 NKX3-2P78367 333 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 DMP1Q13316 513 aaPredicted RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 XKR3Q5GH77 459 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 SLC39A4Q6P5W5 647 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 MICALCLQ6ZW33 695 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 PCSK9Q8NBP7 692 aaKnown RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 FBXO25Q8TCJ0 367 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 DDX1Q92499 740 aaKnown RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 C16orf70Q9BSU1 422 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 NUP85Q9BW27 656 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 MCOLN1Q9GZU1 580 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 TUT1Q9H6E5 874 aaKnown RBP18.62■□□□□ 0.57
FAM3A-222ENST00000621967 C17orf75Q9HAS0 396 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 ACP6Q9NPH0 428 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 SNX24Q9Y343 169 aa18.62■□□□□ 0.57
FAM3A-222ENST00000621967 E7EVH7 732 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 CST5P28325 142 aaPredicted RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 PMS2P54278 862 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 SIX1Q15475 284 aaPredicted RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 OTUD6AQ7L8S5 288 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 C12orf50Q8NA57 414 aaPredicted RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 ARRDC4Q8NCT1 418 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 FBXL13Q8NEE6 735 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 KLHDC9Q8NEP7 349 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 KIFAP3Q92845 792 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 MAGOHBQ96A72 148 aaKnown RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 RUNDC3BQ96NL0 473 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 NT5C1BQ96P26 610 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 DENND3A2RUS2 1198 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 CCDC169A6NNP5 214 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 DCDC2CA8MYV0 355 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 F2P00734 622 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 PYGMP11217 842 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 RPL21P46778 160 aaKnown RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 PDE6CP51160 858 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 PLTPP55058 493 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 MAGOHP61326 146 aaKnown RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 PURAQ00577 322 aaKnown RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 HOOK3Q86VS8 718 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 SLC13A5Q86YT5 568 aaPredicted RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 BSNDQ8WZ55 320 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 ZNF653Q96CK0 615 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 KIFC3Q9BVG8 833 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 KATNAL1Q9BW62 490 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 KMT5AQ9NQR1 393 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 NRBP2Q9NSY0 501 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 BCCIPQ9P287 314 aaKnown RBP eCLIP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 PARP2Q9UGN5 583 aa18.61■□□□□ 0.57
FAM3A-222ENST00000621967 CHORDC1Q9UHD1 332 aaPredicted RBP18.61■□□□□ 0.57
FAM3A-222ENST00000621967 GMNCA6NCL1 334 aa18.6■□□□□ 0.57
FAM3A-222ENST00000621967 STBD1O95210 358 aa18.6■□□□□ 0.57
FAM3A-222ENST00000621967 ATP4AP20648 1035 aa18.6■□□□□ 0.57
FAM3A-222ENST00000621967 LIG3P49916 1009 aa18.6■□□□□ 0.57
FAM3A-222ENST00000621967 CYP24A1Q07973 514 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms